Difference between revisions of "Small Molecules for Xenopus Research"

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(Alphabetical List of Small Molecules With Literature References)
(Alphabetical List of Small Molecules With Literature References)
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==Alphabetical List of Small Molecules With Literature References==
 
==Alphabetical List of Small Molecules With Literature References==
  
 +
*[[1,3-Dicyclohexylurea]]
 
*[[11-cis retinal]]
 
*[[11-cis retinal]]
 
*[[18alpha-glycyrretinic acid]]
 
*[[18alpha-glycyrretinic acid]]
 +
*[[2'-deoxyadenosine]]
 +
*[[2-APB]]
 
*[[3,3,5-triiodothyronine (T3)]]
 
*[[3,3,5-triiodothyronine (T3)]]
 
*[[5HT (seratonin)]]
 
*[[5HT (seratonin)]]
Line 23: Line 26:
 
*[[AZD1480]]
 
*[[AZD1480]]
 
*[[BAPTA-AM]]
 
*[[BAPTA-AM]]
 +
*[[Barasertib]]
 +
*[[Benzaldehyde, 3-allyl-2-(2-(diethylamino)ethoxy)-(DEAB)]]
 +
*[[beta-xyloside]]
 
*[[BMS-453]]
 
*[[BMS-453]]
*[[beta-xyloside]]
 
 
*[[bumetanide]]
 
*[[bumetanide]]
 
*[[calcium ionophore]]
 
*[[calcium ionophore]]
 
*[[CGP54626 ]]
 
*[[CGP54626 ]]
 
*[[Chelerythrine]]
 
*[[Chelerythrine]]
 +
*[[chenodeoxycholic acid]]
 
*[[chymostatin ]]
 
*[[chymostatin ]]
 
*[[Citral]]
 
*[[Citral]]
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*[[Cytochalasin B]]
 
*[[Cytochalasin B]]
 
*[[cytochalasin D]]
 
*[[cytochalasin D]]
 +
*[[D-AP5]]
 +
*[[D-NAME]]
 
*[[Colcemide|Demecolcine]]
 
*[[Colcemide|Demecolcine]]
 
*[[deltamethrin]]
 
*[[deltamethrin]]
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*[[diazepam]]
 
*[[diazepam]]
 
*[[Difopein]]
 
*[[Difopein]]
 +
*[[DMH-1]]
 
*[[Dorsomorphin]]
 
*[[Dorsomorphin]]
 +
*[[DRB]]
 
*[[Ex-527]]
 
*[[Ex-527]]
 +
*[[finasteride]]
 +
*[[folic acid]]
 
*[[forskolin]]
 
*[[forskolin]]
 
*[[fusicoccin]]
 
*[[fusicoccin]]
 
*[[gentamycin]]
 
*[[gentamycin]]
 +
*[[GSK3-inhibitor IX (BIO)]]
 
*[[GM6001]]
 
*[[GM6001]]
 
*[[heptanol]]
 
*[[heptanol]]
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*[[jasplakinolide]]
 
*[[jasplakinolide]]
 
*[[KT 5720]]
 
*[[KT 5720]]
 +
*[[L-NAME]]
 
*[[lansoprazole]]
 
*[[lansoprazole]]
 
*[[latrunculin B]]
 
*[[latrunculin B]]
 +
*[[LDN193187]]
 +
*[[leucovorin]]
 
*[[LiCl]]
 
*[[LiCl]]
 
*[[LY294002]]
 
*[[LY294002]]
 +
*[[methotrexate (MTX)]]
 +
*[[metronidazole]]
 
*[[Mg132]]
 
*[[Mg132]]
 
*[[MMP-2 inhibitor II]]
 
*[[MMP-2 inhibitor II]]
 
*[[nicorandil]]
 
*[[nicorandil]]
 
*[[Nicotinamide]]
 
*[[Nicotinamide]]
 +
*[[Nicotinic acid]]
 
*[[nifedipine]]
 
*[[nifedipine]]
 
*[[nocodazole]]
 
*[[nocodazole]]
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*[[olomoucine]]
 
*[[olomoucine]]
 
*[[ouabain]]
 
*[[ouabain]]
 +
*[[PD173074]]
 
*[[PD-407824]]
 
*[[PD-407824]]
 
*[[p-MPPI]]
 
*[[p-MPPI]]
Line 79: Line 99:
 
*[[PP2]]
 
*[[PP2]]
 
*[[primaquine]]
 
*[[primaquine]]
 +
*[[Progesterone]]
 
*[[propylthiouracil]]
 
*[[propylthiouracil]]
 +
*[[pyrimethamine]]
 
*[[quinpirole]]
 
*[[quinpirole]]
 
*[[rapamycin]]
 
*[[rapamycin]]
 
*[[retinoic acid]]
 
*[[retinoic acid]]
 
*[[Retinol]]
 
*[[Retinol]]
 +
*[[RO-3306]]
 
*[[RS67333]]
 
*[[RS67333]]
 
*[[RU486]]
 
*[[RU486]]
 
*[[SB 203580]]
 
*[[SB 203580]]
 +
*[[SB 505124]]
 
*[[SCH28080]]
 
*[[SCH28080]]
 +
*[[SNAP]]
 
*[[sodium nitroprusside]]
 
*[[sodium nitroprusside]]
 
*[[SP600125 ]]
 
*[[SP600125 ]]
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*[[thyroxine (T4)]]
 
*[[thyroxine (T4)]]
 
*[[Torin 2]]
 
*[[Torin 2]]
 +
*[[trimetrexate]]
 
*[[TTNPB]]
 
*[[TTNPB]]
 +
*[[Tubercidin]]
 
*[[tunicamycin]]
 
*[[tunicamycin]]
 
*[[Tyrphostin AG 1478]]
 
*[[Tyrphostin AG 1478]]
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The Following are in need of standardization and curation
 
The Following are in need of standardization and curation
 +
*[[AM251]]
 +
*[[AM281]]
 
*[[AP1510]]
 
*[[AP1510]]
 
*[[AR-A014418]]
 
*[[AR-A014418]]
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*[[beclomethasone]]
 
*[[beclomethasone]]
 
*[[Butyrate]]
 
*[[Butyrate]]
 +
*[[calcicludine]]
 +
*[[Calyculin A]]
 
*[[celastrol]]
 
*[[celastrol]]
 
*[[celecoxib]]
 
*[[celecoxib]]
 
*[[chromanol 293B]]
 
*[[chromanol 293B]]
 +
*[[chlorate]]
 
*[[cytochalasin D]]  
 
*[[cytochalasin D]]  
 
*[[colchicine]]
 
*[[colchicine]]
Line 118: Line 150:
 
*[[diclofenac]]
 
*[[diclofenac]]
 
*[[etoposide]]
 
*[[etoposide]]
 +
*[[IWR1]]
 
*[[GW843682X]]
 
*[[GW843682X]]
 +
*[[leptomycin B]]
 +
*[[LY320135]]
 +
*[[methylcellulose (MC)]]
 
*[[methimazole]]
 
*[[methimazole]]
 
*[[MBCD or MBetaCD]]
 
*[[MBCD or MBetaCD]]
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*[[RHC80267]]
 
*[[RHC80267]]
 
*[[RL-3]]
 
*[[RL-3]]
 +
*[[SAG]]
 
*[[SB-431542]]
 
*[[SB-431542]]
*[[SB505124]]
 
 
*[[TG003]]
 
*[[TG003]]
 
*[[Thapsigargin]]
 
*[[Thapsigargin]]
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*[[U0126]]
 
*[[U0126]]
 
*[[U73122]]
 
*[[U73122]]
 +
*[[ursodeoxycholic acid]]
 
*[[Echinomycin]]
 
*[[Echinomycin]]
 
*[[Gö 6983]]
 
*[[Gö 6983]]
 
*[[phenylhydrazine]]
 
*[[phenylhydrazine]]
 +
*[[ω-conotoxin–GVIA]]
 +
*[[flunarizine]]
 +
*[[tetrodotoxin]]
 +
*[[veratridine]]
  
==List of Molecules Affecting Specific Pathways==
+
==Small Molecules Affecting Pathways==
 
===cAMP===
 
===cAMP===
 
*[[IBMX]]
 
*[[IBMX]]
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===CDK/Cyclins===
 
===CDK/Cyclins===
 
*[[olomoucine]]
 
*[[olomoucine]]
 +
*[[RO-3306]]
  
 
===ERK/MAPK===
 
===ERK/MAPK===
 
*[[U0126]]
 
*[[U0126]]
 +
===Folic Acid===
 +
*[[Methotrexate (MTX)]]
  
 
===JAK/STAT===
 
===JAK/STAT===
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*[[cyclopamine]]
 
*[[cyclopamine]]
 
*[[purmorphamine]]
 
*[[purmorphamine]]
 +
*[[Vismodegib]]
  
 
===TGF-beta/BMP===
 
===TGF-beta/BMP===
Line 188: Line 233:
 
===Wnt===
 
===Wnt===
 
*[[LiCl]]
 
*[[LiCl]]
 +
*[[GSK3-inhibitor IX (BIO)]]
 +
*[[IWR1]]
  
 
===Epigenetics===
 
===Epigenetics===
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*[[GI254023X| GI254023X MMP10 inhibitor]]
 
*[[GI254023X| GI254023X MMP10 inhibitor]]
  
==Small Molecules by Biological Function==
+
==Small Molecules affecting Biological Functions & Processes==
 
===Angiogenesis===
 
===Angiogenesis===
 
*[[dimethyloxallyl glycine (DMOG)]]
 
*[[dimethyloxallyl glycine (DMOG)]]
Line 240: Line 287:
 
*[[olomoucine]]
 
*[[olomoucine]]
 
*[[PD-407824]]
 
*[[PD-407824]]
 +
===Cilia===
 +
*[[methylcellulose (MC)]]
  
 
===DNA Damage/Repair===
 
===DNA Damage/Repair===
 
*[[etoposide]]
 
*[[etoposide]]
 
*[[Hydroxyurea]]
 
*[[Hydroxyurea]]
 +
 +
===DNA Synthesis===
 +
*[[Calyculin A]]
  
 
===Growth Cone, Filopodia, and other Cytoskeletal projections===
 
===Growth Cone, Filopodia, and other Cytoskeletal projections===
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===Hatching===
 
===Hatching===
 
*[[ouabain]]
 
*[[ouabain]]
 +
 +
===Left-Right Patterning===
 +
*[[methylcellulose (MC)]]
  
 
===Metamorphosis===
 
===Metamorphosis===
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===Channels, including ATPases===
 
===Channels, including ATPases===
 
*[[ouabain]]
 
*[[ouabain]]
 +
*[[AM251]]
 +
*[[AM281]]
 +
*[[LY320135]]
 
===G Protein Receptors===
 
===G Protein Receptors===
 
*[[purmorphamine]]
 
*[[purmorphamine]]
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*[[okadaic acid]]
 
*[[okadaic acid]]
 
*[[tautomycin]]
 
*[[tautomycin]]
 +
*[[Calyculin A]]
  
 
===Small GTPases===
 
===Small GTPases===
Line 299: Line 358:
 
*[[anisomycin]] 40uM Sigma
 
*[[anisomycin]] 40uM Sigma
 
*[[cycloheximide]] 40uM
 
*[[cycloheximide]] 40uM
 +
 +
===Retinoids===
 +
*[[TTNPB]] Sigma
  
 
==Textpresso Small Molecules to Research==
 
==Textpresso Small Molecules to Research==
Line 307: Line 369:
  
 
==Models of Anemia==
 
==Models of Anemia==
*[phenylhydrazine]
+
*[[Phenylhydrazine]]

Revision as of 16:34, 26 February 2018

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Important small molecule references

Alphabetical List of Small Molecules With Literature References

The Following are in need of standardization and curation

Small Molecules Affecting Pathways

cAMP

CDK/Cyclins

ERK/MAPK

Folic Acid

JAK/STAT

JNK

Nitric Oxide

PDGF

Retinoic Acid

Shh

TGF-beta/BMP

Thyroid Signaling

Wnt

Epigenetics

Protease Inhibitors

Small Molecules affecting Biological Functions & Processes

Angiogenesis

Apoptosis

Autophagy

Calcium Signaling

Circadian Rhythm

Cytoskeletal Inhibitors

Cell Cycle, including mitosis

Cilia

DNA Damage/Repair

DNA Synthesis

Growth Cone, Filopodia, and other Cytoskeletal projections

Hatching

Left-Right Patterning

Metamorphosis

Neurotransmission

Protein Recycling

Drugs by Gene Class

Channels, including ATPases

G Protein Receptors

Kinases

Phosphatases

Small GTPases

Protein Synthesis

Retinoids

Textpresso Small Molecules to Research

Models of Anemia