XB-FEAT-22065335: Difference between revisions
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07JUNE 2023 | 07JUNE 2023 | ||
Following review and analysis by Xenbase, this gene has been renamed, changing from ''msantdl.2'' to ''mypopl2, myb-related transcription factor, partner of profilin like 2, gene 1). | |||
=Synteny in ''Xenopus''= | |||
Xtr v10 Chr7: LOC116412206(unch/lncRNA)> LOC116412415(unch) timm8b.L< sdhd.L> | |||
Xla v10 Chr7L: LOC108697003(mypopl#)> LOC121395551(mypopl#> '''msantdl.2.L(now mypopl2)'''> timm8b.L< sdhd.L> | |||
Xla v10 Chr7S: LOC121396476(cfap251)< timm8b.S< sdhd.S> | |||
*in v10 Xlaevis genome annoattion, there is a duplication with 3 ''mypop'' genes. | |||
*using the gene immediately adjacent to ''timm8b'' as the anchor, we have assigned ‘gene 1’ and the other 2 duplication in Xlaevis will be gene 2 and gene 3. | |||
Revision as of 10:34, 8 June 2023
mypopl2
This is the community wiki page for the gene mypopl2 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
nomenclature and orthology notes
07JUNE 2023 Following review and analysis by Xenbase, this gene has been renamed, changing from msantdl.2 to mypopl2, myb-related transcription factor, partner of profilin like 2, gene 1).
Synteny in Xenopus
Xtr v10 Chr7: LOC116412206(unch/lncRNA)> LOC116412415(unch) timm8b.L< sdhd.L>
Xla v10 Chr7L: LOC108697003(mypopl#)> LOC121395551(mypopl#> msantdl.2.L(now mypopl2)> timm8b.L< sdhd.L>
Xla v10 Chr7S: LOC121396476(cfap251)< timm8b.S< sdhd.S>
- in v10 Xlaevis genome annoattion, there is a duplication with 3 mypop genes.
- using the gene immediately adjacent to timm8b as the anchor, we have assigned ‘gene 1’ and the other 2 duplication in Xlaevis will be gene 2 and gene 3.