XB-FEAT-479633: Difference between revisions
| Line 19: | Line 19: | ||
In ''X. tropicalis'' v9.1 and v10 ''slc5a8.1'' is on Chromosome 3, in the following gene order: | In ''X. tropicalis'' v9.1 and v10 ''slc5a8.1'' is on Chromosome 3, in the following gene order: | ||
[prov]muc1>. anno4> [prov]slc5a8.2< slc5a8.1> utp20> arl1< spic> | XtrChr10: ''[prov]muc1>. anno4> [prov]slc5a8.2< '''slc5a8.1>''' utp20> arl1< spic>'' | ||
A second 'slc5a8' gene is annotated on Chr 10, but although this is not present in the v10 annotation, it remains in the Xenbase liftover genome. | A second 'slc5a8' gene is annotated on Chr 10, but although this is not present in the v10 annotation, it remains in the Xenbase liftover genome. | ||
XtropChr10:v9.1 gene order: ''dynilrb1< itch< asip< '''slc5a8>''' Xetrov90025423m.g> raly<'' | |||
both the Chr3 and Chr10 gene link back to the same scl5a8.1 Xenbase gene page | NB: both the Chr3 and Chr10 gene link back from JBrowse to the same ''scl5a8.1'' Xenbase gene page. | ||
Latest revision as of 08:57, 29 April 2023
slc5a8
This is the community wiki page for the gene slc5a8 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature changes
04/22/2016 Human name has changed for Entrez Gene: 160728. From solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8 to solute carrier family 5 member 8
undated
Xenopus name for XB-GENE-479634, changed from solute carrier family 5 member 8 (slc5a8), to solute carrier family 5 member 8, gene 1. (slc5a8.1)
29APRIL2023
Xenopus gene symbol was changed from slc5a8.1 to slc5a8
gene model and synteny notes
In X. tropicalis v9.1 and v10 slc5a8.1 is on Chromosome 3, in the following gene order:
XtrChr10: [prov]muc1>. anno4> [prov]slc5a8.2< slc5a8.1> utp20> arl1< spic>
A second 'slc5a8' gene is annotated on Chr 10, but although this is not present in the v10 annotation, it remains in the Xenbase liftover genome.
XtropChr10:v9.1 gene order: dynilrb1< itch< asip< slc5a8> Xetrov90025423m.g> raly<
NB: both the Chr3 and Chr10 gene link back from JBrowse to the same scl5a8.1 Xenbase gene page.