XB-FEAT-481372: Difference between revisions

From XenWiki
Jump to navigation Jump to search
imported>Christina
imported>Xenbase
 
Line 5: Line 5:
04/22/2016  
04/22/2016  
Human name has changed for Entrez Gene: 2322. From fms-related tyrosine kinase 3 to fms related tyrosine kinase 3
Human name has changed for Entrez Gene: 2322. From fms-related tyrosine kinase 3 to fms related tyrosine kinase 3
= gene model annotation notes=
10.07.2021
based on conserved synteny patterns in ''X. tropicalis'' and ''X. laevis'', the provisional models from ''X. laevis'' v9.2 genome annotation will be added to the flt3 gene page, and gene models from the latest v10 will then cascade through the gene page when available.
=Synteny=
Xtrop v10:  ''slc46a3> … flt1> … pan3< … '''flt3'''> … urad> … cdx2> … pdx1< ..''
Xla.L v9.2:  ''slc46a3.L>  [RNAs] … flt1.L> … pan3.L< … '''LOC108707566 prov.flt3'''> … urad.L> … cdx2.L> … pdx1.L< ..''
Xla.S v9.2:  ''flt1.S> … pan3. S< … '''LOC108709958 prov flt3.S'''> … urad.S> … cdx2.S>''

Latest revision as of 13:16, 8 October 2021

flt3

This is the community wiki page for the gene flt3 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase

nomenclature changes

04/22/2016 Human name has changed for Entrez Gene: 2322. From fms-related tyrosine kinase 3 to fms related tyrosine kinase 3

gene model annotation notes

10.07.2021

based on conserved synteny patterns in X. tropicalis and X. laevis, the provisional models from X. laevis v9.2 genome annotation will be added to the flt3 gene page, and gene models from the latest v10 will then cascade through the gene page when available.

Synteny

Xtrop v10: slc46a3> … flt1> … pan3< … flt3> … urad> … cdx2> … pdx1< ..

Xla.L v9.2: slc46a3.L> [RNAs] … flt1.L> … pan3.L< … LOC108707566 prov.flt3> … urad.L> … cdx2.L> … pdx1.L< ..

Xla.S v9.2: flt1.S> … pan3. S< … LOC108709958 prov flt3.S> … urad.S> … cdx2.S>