XB-FEAT-5995511: Difference between revisions
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''Xenopus'' scrt2 is on chr10/9_10L/9_10S flanked by tcf15, srcn1 and slc52a3. | ''Xenopus'' scrt2 is on chr10/9_10L/9_10S flanked by tcf15, srcn1 and slc52a3. | ||
XlaChr9_10S Entrez Gene: 108695492: ... tcf15... srxn1... '''''scrt2'''''... slc52a3... | XtrChr9 GeneID:116407977: tcf15 .. srxn1 ... '''LOC116407977(scratch family transcriptional repressor 2)''' ... | ||
XlaChr9_10L:[rv] LOC108701995(riboflavin transporter 2) ...'''LOC108700962(scrt2.L)''' ... LOC108700963(srxn1.L)... tcf15.L ... | |||
XlaChr9_10S Entrez Gene: 108695492: ... tcf15.S... srxn1.S... '''''scrt2.S'''''... slc52a3.S... | |||
Human Chr20: ...TCF15...SRXN1... '''SCRT2'''... SLC52A3.. | Human Chr20: ...TCF15...SRXN1... '''SCRT2'''... SLC52A3.. | ||
A new gene page for ''Xenopus'' 'scrt2' will be built for LOC116407977 scratch family transcriptional repressor 2 | A new gene page for ''Xenopus'' 'scrt2' will be built for LOC116407977, LOC108701995 and Gene ID: 108695492, scratch family transcriptional repressor 2 | ||
Revision as of 08:20, 29 April 2023
scrt1
This is the community wiki page for the gene scrt1 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
nomenclature changes
27APRIL2023
this gene was misidentified as scrt2, AND IS RENAMED HERE AS SCRT1.
Synteny supports it as the true ortholog of human SCRT1:
Xenopus scrt1 genes are on Chr6/6S, flanked by dgat1 and fbxl6.
Human chr8 [Gene ID]: 83482: DGAT1... SCRT1.... TME249.... FBXL6
Xtrop chr6: [GeneID:100486069]: dgat1 ...LOC(tbc1d20) ... loc(cytb11b) ...scrt1 ... fbxl6 ... slc52a1
Xla.Chr6S: nuggc.S ... LOC(mfsd3)... slc39a4... LOC(cpsf1)... scrt1.S
Xenopus scrt2 is on chr10/9_10L/9_10S flanked by tcf15, srcn1 and slc52a3.
XtrChr9 GeneID:116407977: tcf15 .. srxn1 ... LOC116407977(scratch family transcriptional repressor 2) ...
XlaChr9_10L:[rv] LOC108701995(riboflavin transporter 2) ...LOC108700962(scrt2.L) ... LOC108700963(srxn1.L)... tcf15.L ...
XlaChr9_10S Entrez Gene: 108695492: ... tcf15.S... srxn1.S... scrt2.S... slc52a3.S...
Human Chr20: ...TCF15...SRXN1... SCRT2... SLC52A3..
A new gene page for Xenopus 'scrt2' will be built for LOC116407977, LOC108701995 and Gene ID: 108695492, scratch family transcriptional repressor 2