XB-FEAT-5996033: Difference between revisions

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2.27.2021
2.27.2021


Following through review and orthology/synteny analysis by NCBI and RefSeq project [RSCOM-110], it was found that this gene has been lost in many mammals and this gene was rename in Xenopus, Chicken and Zebrafish.
Following thorough review of orthology/synteny by NCBI and RefSeq project [RSCOM-110], it was found that this gene has been lost in mammals and therefor eit was recommended that it be renamed according to nomenclature rules in Xenopus, Chicken and Zebrafish.


Xt GeneID:100037865 XB-GENE-5996034. changed gene symbol and gene name From ''pou4f1.2'' , POU class 4 homeobox 1 to ''pou4f4'' (POU class 4 homeobox 4)
Xt GeneID:100037865 XB-GENE-5996034, changed gene symbol and gene name From ''pou4f1.2'' , POU class 4 homeobox 1 to ''pou4f4'' (POU class 4 homeobox 4)


Same name change will be applied tor  ''Gallus gallus'' [Gga] GeneID: 395521 CGNC:49360 and ''Danio rerio'' [Dre] GeneID:572084 (zgc:158291) ZDB-GENE-061215-70
Same name change will be applied tor  ''Gallus gallus'' [Gga] GeneID: 395521 CGNC:49360 and ''Danio rerio'' [Dre] GeneID:572084 (zgc:158291) ZDB-GENE-061215-70

Latest revision as of 07:51, 26 February 2021

pou4f4

This is the community wiki page for the gene pou4f4 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.


nomeclature updates

this gene is often called " Brain-specific homeobox or POU domain protein 3"

2.27.2021

Following thorough review of orthology/synteny by NCBI and RefSeq project [RSCOM-110], it was found that this gene has been lost in mammals and therefor eit was recommended that it be renamed according to nomenclature rules in Xenopus, Chicken and Zebrafish.

Xt GeneID:100037865 XB-GENE-5996034, changed gene symbol and gene name From pou4f1.2 , POU class 4 homeobox 1 to pou4f4 (POU class 4 homeobox 4)

Same name change will be applied tor Gallus gallus [Gga] GeneID: 395521 CGNC:49360 and Danio rerio [Dre] GeneID:572084 (zgc:158291) ZDB-GENE-061215-70

HGNC cited PMID 21932313 as a source for the recommended symbol POU4F4.

General synteny is:

non-therian gnathostomes (generally) TMLHE<...LOC>...SPRY3>... ..'POU4F-like'>... ...EDNRB2>...POLR1D<...VAMP7>

marsupials (lost) TMLHE<...SPRY3>... ...SPESP1>...LOC<... ...VAMP7>

placental mammals (lost) TMLHE<...LOC>...SPRY3>... ...VAMP7>