XB-FEAT-6462819: Difference between revisions

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=nomenclature changes=
=nomenclature changes=
01/31/2017
Human name has changed for Entrez Gene: 55259. From cancer susceptibility candidate 1 to cancer susceptibility 1

Revision as of 10:44, 31 January 2017

casc1

This is the community wiki page for the gene casc1 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase

XB-GENE-6462819

Gene Symbol: casc1 Gene Name: cancer susceptibility candidate 1

clone information

from the initial image upload from the XDB (Ueno Lab) screen, 2 sets of embryos seemed clearly different from each other, despite being generated using the same clone/probe =XL105j10. This clone matches the lrmp gene in the XB db, but all the images were assigned to the casc1 gene page.

-taking the original sequence data, the 3' end of this clone XL105j10 BLASTS to the casc1 gene model, and the 5' end of the clone BLAST matches the lrmp gene.

-no other data is available for casc1,

-lrmp has been identified as a cillia gene, in a 2015 study from the Wallingford lab, the XBD screen embryos with clear punctate epidermal gene expression have been separated from the other images generated using this clone and these are now posted on the lrmp gene page, as community submitted images. (cjz /xenbase curator: 03/14/2016).

nomenclature changes

01/31/2017 Human name has changed for Entrez Gene: 55259. From cancer susceptibility candidate 1 to cancer susceptibility 1