XB-FEAT-953844 - Revision history

Xenbase: /* notes on synteny and gene evolution/function */

2024-05-14T15:40:02Z

notes on synteny and gene evolution/function

← Older revision		Revision as of 15:40, 14 May 2024
Line 9:		Line 9:

	''uggt1.L and sh3yl1.L'', show expression levels similar to ''hs6st1.L'' (see Figs. S5B and D). Because these two genes are located nearer the ''hs6st1.L'' locus than to ''cep19.L'', it is suggested that ''hs6st1.L, uggt1.L,'' and ''sh3yl1.L'', share cis-regulatory modules, and that these genomic regions were lost or changed during Xla.S chromosome evolution, leading to a change in ''hs6st1.S'' expression pattern."		''uggt1.L and sh3yl1.L'', show expression levels similar to ''hs6st1.L'' (see Figs. S5B and D). Because these two genes are located nearer the ''hs6st1.L'' locus than to ''cep19.L'', it is suggested that ''hs6st1.L, uggt1.L,'' and ''sh3yl1.L'', share cis-regulatory modules, and that these genomic regions were lost or changed during Xla.S chromosome evolution, leading to a change in ''hs6st1.S'' expression pattern."

			Synteny FigureS5A from Yamamoto et al 2023
			[[File:Screenshot 2024-05-14 at 11.36.25 AM.png\|thumb]]

Xenbase: /* hs6st1 */

2024-05-14T15:25:38Z

hs6st1

← Older revision		Revision as of 15:25, 14 May 2024
Line 1:		Line 1:
	=hs6st1=		=''hs6st1''=
	This is the community wiki page for the gene ''hs6st1'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase		This is the community wiki page for the gene ''hs6st1'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase

			=notes on synteny and gene evolution/function=

			source: Yamamoto et al 2023 [https://doi.org/10.1016/j.ydbio.2023.01.011]

			synteny patterns " around ''Hs6st1'' genes are well conserved around the [''Xla.hs6st1.L''] gene and the ''X. tropicalis'' ''hs6st1'' gene. However, three [S homeolog] genes, ''uggt1.S, sh3yl1.S, cep19.S'', were lost from the Xla.S chromosome (see Fig. S5A).

			''uggt1.L and sh3yl1.L'', show expression levels similar to ''hs6st1.L'' (see Figs. S5B and D). Because these two genes are located nearer the ''hs6st1.L'' locus than to ''cep19.L'', it is suggested that ''hs6st1.L, uggt1.L,'' and ''sh3yl1.L'', share cis-regulatory modules, and that these genomic regions were lost or changed during Xla.S chromosome evolution, leading to a change in ''hs6st1.S'' expression pattern."

imported>Xenbase gene generator at 12:00, 10 February 2010

2010-02-10T12:00:00Z

New page

=hs6st1=
This is the community wiki page for the gene ''hs6st1'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase