XB-FEAT-5956385: Difference between revisions
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On September 26, 2018 | On September 26, 2018 | ||
beta-1,3-glucuronyltransferase 1 (b3gat1) was | Gene name for XB-GENE-5956386 beta-1,3-glucuronyltransferase 1 (b3gat1) was changed to beta-1,3-glucuronyltransferase 1 '''like''' ('''''b3gat1l'''''). | ||
B3GAT1-like gene lost along with a neighboring B4GALT-like gene in mammals. | B3GAT1-like gene lost along with a neighboring B4GALT-like gene in mammals. | ||
Orthology to human B3GAT1 remains. There is no ortholog in zebrafish. | |||
synteny notes: | '''synteny notes:''' | ||
archelosaurs, amphibians | archelosaurs, amphibians | ||
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TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4< ...SMAD9>...RFXAP< | TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4< ...SMAD9>...RFXAP< | ||
mammals | mammals (lost) | ||
TEX55>...UPK1B>...B4GALT4<...ARHGAP31>...TMEM39A< | TEX55>...UPK1B>...B4GALT4<...ARHGAP31>...TMEM39A< | ||
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chondrichthyes | chondrichthyes | ||
TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT4>...DRD3> *B4GALT3L may have moved between NOX4 and FOLH1B | TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT4>...DRD3> *B4GALT3L may have moved between NOX4 and FOLH1B | ||
02.27.2021 | |||
Gene name still under review: beta-1,3-glucuronyltransferase 1like (''b3gat1l''), waiting for HGNC approval. | |||
Latest revision as of 10:53, 26 February 2021
b3gat1l
This is the community wiki page for the gene b3gat1l please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature changes
On September 26, 2018
Gene name for XB-GENE-5956386 beta-1,3-glucuronyltransferase 1 (b3gat1) was changed to beta-1,3-glucuronyltransferase 1 like (b3gat1l).
B3GAT1-like gene lost along with a neighboring B4GALT-like gene in mammals.
Orthology to human B3GAT1 remains. There is no ortholog in zebrafish.
synteny notes:
archelosaurs, amphibians TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4<...TMEM39A>...FAAHL<...CHD1L>
squamates TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4< ...SMAD9>...RFXAP<
mammals (lost) TEX55>...UPK1B>...B4GALT4<...ARHGAP31>...TMEM39A<
gar UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4< ...TAF13<...CASR
reedfish TEX55>...UPK1B>...ARHGAP31<...B4GALT3L>...B4GALT4< ...MTMR2>
teleosts TEX55> ...ARHGAP31<...B4GALT4< ...CASR< *I don't think B3GATL and B4GALT3L moved elsewhere.
chondrichthyes TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT4>...DRD3> *B4GALT3L may have moved between NOX4 and FOLH1B
02.27.2021
Gene name still under review: beta-1,3-glucuronyltransferase 1like (b3gat1l), waiting for HGNC approval.