XB-FEAT-940177: Difference between revisions
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= | =fas= | ||
This is the community wiki page for the gene '' | This is the community wiki page for the gene ''fas'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | ||
=nomenclature notes= | |||
'''''fas (Fas cell surface death receptor )''''' is also called ''tnfrsf6 (TNF receptor superfamily, member 6)'' where 'TNF' stands for 'tumor necrosis factor'. | |||
=protein alignment= | |||
alignment of 2 proteins in NCBI NP_001096199.1 ( Xtrop) vs XP_018080527.1 ( X. laevis ) show significant similarity, ( at 3-bit) | |||
NP_001096199.1 1 MLLPWICLFIALAAERNSASAINNIGDTSPAYTGKPSAPLRRFFKRELKCEDGEYPGNQYCCKNCPAGTYVENDCQENHQ 80 | |||
XP_018080527.1 1 MLLPWICLFITLAVERNSASAIHNIEDSSNTFIAKPSLSLHKVFKRQSKCLDWQYPGNQFCCGKCPAGTRVENDCQKEHE 80 | |||
NP_001096199.1 81 KPNCQPCTDGKDYMDKPNGYHQCLLCKRCDPEQGEDVHSPCTVFRNTVCKCKVNFFCGTNSTQDPRSCDHCQPCTQCEKG 160 | |||
XP_018080527.1 81 NSTCIPCTEGKDYMDQLNGYNQCLRCKPCD--QEQEVDSPCTVFHDTVCKCKANYFCSSNTSQDPRICDHCLPCTQCGNG 158 | |||
NP_001096199.1 161 VAESCTETRDTVCNKGSRYRWGLLAALILVAVGAGLLCVRCRQKPRPIYQPPTLTPLVKPYPSHLEDIDLETPLQDLADI 240 | |||
XP_018080527.1 159 IAEKCTATKDTVC-KGSRSHWAALGALIPLVVCA-VVCVRCRQKTRIIVPPRA--PQAEPYPSYLKDIDLEPHLQDLAGK 234 | |||
NP_001096199.1 241 MLHDDVVKCVRRMGLSNPTIDDIKNTNGQGREGRYQLLRSWYVQYGQMGALRHLIKTLRDQGLNKPADDFIDILNRRVQP 320 | |||
XP_018080527.1 235 MLYEQMVQCVRKMDLTEPVIDDIKNSHGKGFEGKYQLLRSWYTYHGQTGAFQQLIETLQERGFNRPAQNIIDFLKSKVQP 314 | |||
Latest revision as of 11:28, 15 September 2021
fas
This is the community wiki page for the gene fas please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature notes
fas (Fas cell surface death receptor ) is also called tnfrsf6 (TNF receptor superfamily, member 6) where 'TNF' stands for 'tumor necrosis factor'.
protein alignment
alignment of 2 proteins in NCBI NP_001096199.1 ( Xtrop) vs XP_018080527.1 ( X. laevis ) show significant similarity, ( at 3-bit)
NP_001096199.1 1 MLLPWICLFIALAAERNSASAINNIGDTSPAYTGKPSAPLRRFFKRELKCEDGEYPGNQYCCKNCPAGTYVENDCQENHQ 80
XP_018080527.1 1 MLLPWICLFITLAVERNSASAIHNIEDSSNTFIAKPSLSLHKVFKRQSKCLDWQYPGNQFCCGKCPAGTRVENDCQKEHE 80
NP_001096199.1 81 KPNCQPCTDGKDYMDKPNGYHQCLLCKRCDPEQGEDVHSPCTVFRNTVCKCKVNFFCGTNSTQDPRSCDHCQPCTQCEKG 160
XP_018080527.1 81 NSTCIPCTEGKDYMDQLNGYNQCLRCKPCD--QEQEVDSPCTVFHDTVCKCKANYFCSSNTSQDPRICDHCLPCTQCGNG 158
NP_001096199.1 161 VAESCTETRDTVCNKGSRYRWGLLAALILVAVGAGLLCVRCRQKPRPIYQPPTLTPLVKPYPSHLEDIDLETPLQDLADI 240
XP_018080527.1 159 IAEKCTATKDTVC-KGSRSHWAALGALIPLVVCA-VVCVRCRQKTRIIVPPRA--PQAEPYPSYLKDIDLEPHLQDLAGK 234
NP_001096199.1 241 MLHDDVVKCVRRMGLSNPTIDDIKNTNGQGREGRYQLLRSWYVQYGQMGALRHLIKTLRDQGLNKPADDFIDILNRRVQP 320
XP_018080527.1 235 MLYEQMVQCVRKMDLTEPVIDDIKNSHGKGFEGKYQLLRSWYTYHGQTGAFQQLIETLQERGFNRPAQNIIDFLKSKVQP 314