XB-FEAT-940177: Difference between revisions
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=nomenclature notes= | =nomenclature notes= | ||
fas (Fas cell surface death receptor ) is also called | '''''fas (Fas cell surface death receptor )''''' is also called ''tnfrsf6 (TNF receptor superfamily, member 6)'' where 'TNF' stands for 'tumor necrosis factor'. | ||
=protein alignment= | =protein alignment= | ||
alignment of 2 proteins in NCBI NP_001096199.1 ( Xtrop) vs XP_018080527.1 ( X. laevis ) show significant similarity, ( at 3-bit) | alignment of 2 proteins in NCBI NP_001096199.1 ( Xtrop) vs XP_018080527.1 ( X. laevis ) show significant similarity, ( at 3-bit) | ||
Latest revision as of 11:28, 15 September 2021
fas
This is the community wiki page for the gene fas please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature notes
fas (Fas cell surface death receptor ) is also called tnfrsf6 (TNF receptor superfamily, member 6) where 'TNF' stands for 'tumor necrosis factor'.
protein alignment
alignment of 2 proteins in NCBI NP_001096199.1 ( Xtrop) vs XP_018080527.1 ( X. laevis ) show significant similarity, ( at 3-bit)
NP_001096199.1 1 MLLPWICLFIALAAERNSASAINNIGDTSPAYTGKPSAPLRRFFKRELKCEDGEYPGNQYCCKNCPAGTYVENDCQENHQ 80
XP_018080527.1 1 MLLPWICLFITLAVERNSASAIHNIEDSSNTFIAKPSLSLHKVFKRQSKCLDWQYPGNQFCCGKCPAGTRVENDCQKEHE 80
NP_001096199.1 81 KPNCQPCTDGKDYMDKPNGYHQCLLCKRCDPEQGEDVHSPCTVFRNTVCKCKVNFFCGTNSTQDPRSCDHCQPCTQCEKG 160
XP_018080527.1 81 NSTCIPCTEGKDYMDQLNGYNQCLRCKPCD--QEQEVDSPCTVFHDTVCKCKANYFCSSNTSQDPRICDHCLPCTQCGNG 158
NP_001096199.1 161 VAESCTETRDTVCNKGSRYRWGLLAALILVAVGAGLLCVRCRQKPRPIYQPPTLTPLVKPYPSHLEDIDLETPLQDLADI 240
XP_018080527.1 159 IAEKCTATKDTVC-KGSRSHWAALGALIPLVVCA-VVCVRCRQKTRIIVPPRA--PQAEPYPSYLKDIDLEPHLQDLAGK 234
NP_001096199.1 241 MLHDDVVKCVRRMGLSNPTIDDIKNTNGQGREGRYQLLRSWYVQYGQMGALRHLIKTLRDQGLNKPADDFIDILNRRVQP 320
XP_018080527.1 235 MLYEQMVQCVRKMDLTEPVIDDIKNSHGKGFEGKYQLLRSWYTYHGQTGAFQQLIETLQERGFNRPAQNIIDFLKSKVQP 314