XB-FEAT-22068609: Difference between revisions

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Created page with "=XB22068599 = =ortholog and synteny notes= two Human orthologs used to be linked to XB-genepage-22068609 for XB22068609 [provisional], Human to LOC102724200 and LOC1079849..."
 
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two Human orthologs used to be linked to  XB-genepage-22068609 for  XB22068609 [provisional], Human  to LOC102724200 and LOC107984974
two Human orthologs used to be linked to  XB-genepage-22068609 for  XB22068609 [provisional], Human  to LOC102724200 and LOC107984974


AS neither human gene seems to have any syntenic pattern in common with Xtrv9.1 annotation for this gene, both have been removed. THis provisional gene may or may not  survive to the V10 anotations.  
AS neither human gene seems to have any syntenic pattern in common with Xtrv9.1 annotation for this gene, both have been removed. This provisional gene may or may not  survive to the V10 annotations.
 
Note XB22068609 may be a small fragment of the larger gene ''trafficking protein particle complex subunit 10'' trappc10 upstream a little in the v9.1 annotation.


'''LOC102724200'''  = trafficking protein particle complex subunit 10-like
'''LOC102724200'''  = trafficking protein particle complex subunit 10-like


HUMAN: chr21 GATD3B < '''LOC102724159'''<  LOC102724200<
HUMAN: chr21 GATD3B < '''LOC102724159'''<  LOC102724200<


'''LOC107984974''' = SMAD specific E3 ubiquitin protein ligase 2 (SMURF2) pseudogene
'''LOC107984974''' = SMAD specific E3 ubiquitin protein ligase 2 (SMURF2) pseudogene


HUMAN ON CHR17:  RNF135> DPRXP4> '''LOC107984974''' > LOC< LOC> LOC< LOC> MIR4733
HUMAN ON CHR17:  RNF135> DPRXP4> '''LOC107984974''' > LOC< LOC> LOC< LOC> MIR4733


XTR. V9.1 scaffold_724:27779..29622 (+ strand): agpat3 > trappc10> '''XB22068599'''> pwp2>
XTR. V9.1 scaffold_724:27779..29622 (+ strand): agpat3 > trappc10> '''XB22068599'''> pwp2>

Latest revision as of 15:28, 8 July 2021

XB22068599

ortholog and synteny notes

two Human orthologs used to be linked to XB-genepage-22068609 for XB22068609 [provisional], Human to LOC102724200 and LOC107984974

AS neither human gene seems to have any syntenic pattern in common with Xtrv9.1 annotation for this gene, both have been removed. This provisional gene may or may not survive to the V10 annotations.

Note XB22068609 may be a small fragment of the larger gene trafficking protein particle complex subunit 10 trappc10 upstream a little in the v9.1 annotation.

LOC102724200 = trafficking protein particle complex subunit 10-like

HUMAN: chr21 GATD3B < LOC102724159< LOC102724200<


LOC107984974 = SMAD specific E3 ubiquitin protein ligase 2 (SMURF2) pseudogene

HUMAN ON CHR17: RNF135> DPRXP4> LOC107984974 > LOC< LOC> LOC< LOC> MIR4733


XTR. V9.1 scaffold_724:27779..29622 (+ strand): agpat3 > trappc10> XB22068599> pwp2>