XB-FEAT-6462861: Difference between revisions

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08May2023
08May2023


Protein alignment for ''Xenopus trop il17rel'' and the 3x ''X. laevis il17rel'' genes with orthologs in huma,n chick and fish confirmed orthology nad that the 2 Xlaevis gens are each others closest pair.
Protein alignment for ''Xenopus trop il17rel'' and the 3x ''X. laevis il17rel'' genes with orthologs in human, chick and fish confirms orthology and that the 2 X. laevis genes are each others closest pair.


ref|XP_041444452.1|
ref|XP_041444452.1|

Latest revision as of 11:53, 28 July 2023

il17rel

thsi is the community wiki page for the Xenopus il17rel genes. Please post here any relevant information about these genes that is not found elsewhere on Xenbase.

nomenclature changes

08MAY2023

Xenopus gene name was suffixed with 'gene 1' as there are 2 il17rel genes on the X. laevis L sub-genome LOC108711163 and LOC121401505.

A new gene page for the 2nd X. laevis il17rel.2 gene has been made: XB-GENEPAGE-29208227

28JULY2023

Human name has changed for Entrez Gene: 400935. From interleukin 17 receptor E-like gene 2 to interleukin 17 receptor E like

synteny

Xtr.Chr3: qrich1l> mov10l1< mlc1> il17rel> pim3> alg12> creid2< zbed4< brd1>

Xla.chr3L: qrich1.L> mov10l1.L< LOC#1162(mlc1)> LOC108711163(il17rel gene1)> LOC121401505(il17rel gene 2) pim3.L> alg12.L> creid2.L< zbed4.l<

Xla.chr3S(rv): qrich1l.>S LOC121402185(il17rel)> [2x ncRNAs] pim3.S> creid2.S< zbed4<.S brd1.S>


protein alignment

08May2023

Protein alignment for Xenopus trop il17rel and the 3x X. laevis il17rel genes with orthologs in human, chick and fish confirms orthology and that the 2 X. laevis genes are each others closest pair.

ref|XP_041444452.1| ref|XP_018108100.2| ref|XP_041442366.1| ref|XP_012815430.1| ref|NP_001001694.2| ref|XP_002666936.2| ref|XP_015129182.2|