XB-FEAT-489237: Difference between revisions
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=gjb3= | =''gjb3''= | ||
This is the community wiki page for the gene ''gjb3'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | This is the community wiki page for the gene ''gjb3'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. | ||
=synteny = | |||
the conserved sequence of protein coding genes was compared across taxa to inform how to apply gene names to this groups of ''gib, gpa'' and ''cx3 '' genes: | |||
''X.tropicalis'' chr2: ''LOC105946490 LOC108645861 gjb4 LOC101734565 '''gjb3 cx38 gja4''' smim12 zmpste24 tmem30b kdm1a'' | |||
''X.laevis'' chr2L: ''kdm1a.L tmem30b.L zmpste24.L smim12.L '''gja4.L gjb3.L gjb5.L gjb4.L''' luzp1.L mtfr1l.L rlf.L'' | |||
''X.laevis'' chr2S: ''kcnq4.S smap2.S col9a2.S csmd2.S '''gjb5.S gjb3.; cx38.S gja4.S''' smim12.S zmpste24.S kdm1a.S'' | |||
M.musculus chr4: Gm52707 Smim12 Gm22221 Gm12948(ncRNA) '''Gja4 Gjb3'''Gm40251 '''Gjb4 GJB5''' Gm12947 Gm40252 | |||
M.musculus chr4: Gm52707 Smim12 Gm22221 Gm12948(ncRNA) '''Gja4 Gjb3'''Gm40251 '''Gjb4 GJB5''' Gm12947 Gm40252 | |||
M.musculus chr4: Gm52707 Smim12 Gm22221 Gm12948(ncRNA) '''Gja4 Gjb3'''Gm40251 '''Gjb4 GJB5''' Gm12947 Gm40252 | |||
=nomenclature changes= | |||
Latest revision as of 09:45, 11 March 2024
gjb3
This is the community wiki page for the gene gjb3 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
synteny
the conserved sequence of protein coding genes was compared across taxa to inform how to apply gene names to this groups of gib, gpa and cx3 genes:
X.tropicalis chr2: LOC105946490 LOC108645861 gjb4 LOC101734565 gjb3 cx38 gja4 smim12 zmpste24 tmem30b kdm1a
X.laevis chr2L: kdm1a.L tmem30b.L zmpste24.L smim12.L gja4.L gjb3.L gjb5.L gjb4.L luzp1.L mtfr1l.L rlf.L
X.laevis chr2S: kcnq4.S smap2.S col9a2.S csmd2.S gjb5.S gjb3.; cx38.S gja4.S smim12.S zmpste24.S kdm1a.S
M.musculus chr4: Gm52707 Smim12 Gm22221 Gm12948(ncRNA) Gja4 Gjb3Gm40251 Gjb4 GJB5 Gm12947 Gm40252
M.musculus chr4: Gm52707 Smim12 Gm22221 Gm12948(ncRNA) Gja4 Gjb3Gm40251 Gjb4 GJB5 Gm12947 Gm40252
M.musculus chr4: Gm52707 Smim12 Gm22221 Gm12948(ncRNA) Gja4 Gjb3Gm40251 Gjb4 GJB5 Gm12947 Gm40252