XB-FEAT-29077750: Difference between revisions
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The ''X. tropicalis'' gene previously named ''LOC100485335'' ( | The ''X. tropicalis'' gene (NCBI:100485335, XB-model:XBXT10g008942) previously named ''LOC100485335'' and referred in the literature as ''pax6.2'' (PMID: 25724657; PMCID: PMC4549229; DOI: 10.1016/j.ydbio.2015.02.012), was identified as a paralog of the ''pax6'' / "paired box 6" gene (NCBI:448447, XB-model:XBXT10g001595) and verified by Xenbase curators. Due to its location on a separate genomic locus (chr7) than ''pax6'' (chr4), it is assigned the name ''pax6l'' / "paired box 6 like". | ||
''X. laevis'' orthologs of ''pax6l'' were identified by synteny and sequence homology as (L homeolog: NCBI-ID:108696727, XB-model:XBXL10_1g31762) and (S homeolog: NCBI:108697776, XB-model:XBXL10_1g33691), previously ''LOC108696727'' and ''LOC108697776'', respectively. | ''X. laevis'' orthologs of ''pax6l'' were identified by synteny and sequence homology as (L homeolog: NCBI-ID:108696727, XB-model:XBXL10_1g31762) and (S homeolog: NCBI:108697776, XB-model:XBXL10_1g33691), previously ''LOC108696727'' and ''LOC108697776'', respectively. | ||
Synonyms for previously assigned/referenced gene symbols ''pax6.2'', ''LOC100485335'', ''LOC108696727'' and ''LOC108697776'' are submitted for addition to the XB-GENEPAGE-29077750 for searchability. | |||
Latest revision as of 11:38, 16 July 2024
pax6l
This is the community wiki page for the gene pax6l please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature changes
07/16/2024
The X. tropicalis gene (NCBI:100485335, XB-model:XBXT10g008942) previously named LOC100485335 and referred in the literature as pax6.2 (PMID: 25724657; PMCID: PMC4549229; DOI: 10.1016/j.ydbio.2015.02.012), was identified as a paralog of the pax6 / "paired box 6" gene (NCBI:448447, XB-model:XBXT10g001595) and verified by Xenbase curators. Due to its location on a separate genomic locus (chr7) than pax6 (chr4), it is assigned the name pax6l / "paired box 6 like".
X. laevis orthologs of pax6l were identified by synteny and sequence homology as (L homeolog: NCBI-ID:108696727, XB-model:XBXL10_1g31762) and (S homeolog: NCBI:108697776, XB-model:XBXL10_1g33691), previously LOC108696727 and LOC108697776, respectively.
Synonyms for previously assigned/referenced gene symbols pax6.2, LOC100485335, LOC108696727 and LOC108697776 are submitted for addition to the XB-GENEPAGE-29077750 for searchability.