XB-FEAT-22065331: Difference between revisions

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=''msantdl.1 [provisional]''=
=''msantdl''=


This is the community wiki page for the gene ''msantdl.1 [provisional]'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
This is the community wiki page for the gene ''msantdl'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.


=nomenclature changes=
=nomenclature changes=


11.30.2020.
11.30.2020.
This gene 's name was corrected by removing human loci number from the gene name and gene symbol, following notification of the issue by NCBIs refseq coordinator (RSCOM-106).
This gene 's name was corrected by removing human loci number from the gene name and gene symbol, following notification of the issue by NCBIs refseq coordinator (RSCOM-106).


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Symbol changed from ''myb1.1100496870'' to  ''msantdl.1 [provisional]''
Symbol changed from ''myb1.1100496870'' to  ''msantdl.1 [provisional]''
=ORTHOLOGS=
08.30.2021
the human ortholog has been updated  for the ''Xenopus msantd2l'' genes.
Synteny patterns support the ortholog change from the human MSAND2P1 (a psuedogene on chromsome 21) to MSANTD2, a functional gene on Chromosome 11.
HUMAN CHRM 11: LOC112061819> ... ESAM-AS1</ESAM> ... '''MSANTD2'''< ... MSANTD2-AS1> ...ROBO3


XTR CHR 7: (REV) vsig2> ...esam> ... '''''msantd2'''''>  ...    robo3< ...robo4 >
05 JUNE 2023


XLA CHR7:      vsig2.L>    esam.L> ... ''''LOC100493716.L''''> ...robo3.L> ...robo4.L
To simplify gene nomenclature  and orthology assiment, we removed the '.1' and [provisonal] from gene symbol and gene name. Status was the changed to 'partially curated' within the database.


compared with the human pseudogene MSANTD2P1 ON CHROMOSOME 21:
Note that this gene model is not represented in the v10 ''X. tropicalis'' assembly.


MIR6130> .... ZNF299P<  ... '''MSANTD2P1'''>  ...  RIVU2-55P ....   DS2152088E
NB: Human symbol for this genes ortholog is MSANTD2P1, as it is a pseudogene in Human, whereas it is a protein coding gene in Xenopus.

Latest revision as of 10:24, 28 August 2024

msantdl

This is the community wiki page for the gene msantdl please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.

nomenclature changes

11.30.2020.

This gene 's name was corrected by removing human loci number from the gene name and gene symbol, following notification of the issue by NCBIs refseq coordinator (RSCOM-106).

Name changed from: Myb/SANT-like DNA-binding domain containing 100496870 gene 1 [provisional] to Myb/SANT DNA-binding domain containing like gene 1 [provisional] ( Note also corrected syntaxt to follow human gene name).

Symbol changed from myb1.1100496870 to msantdl.1 [provisional]

05 JUNE 2023

To simplify gene nomenclature and orthology assiment, we removed the '.1' and [provisonal] from gene symbol and gene name. Status was the changed to 'partially curated' within the database.

Note that this gene model is not represented in the v10 X. tropicalis assembly.

NB: Human symbol for this genes ortholog is MSANTD2P1, as it is a pseudogene in Human, whereas it is a protein coding gene in Xenopus.