XB-FEAT-971749: Difference between revisions
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=''cyp3a4 | =''cyp3a4''= | ||
This is the community wiki page for the gene ''cyp3a4 | This is the community wiki page for the gene ''cyp3a4'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | ||
=synteny= | =synteny= | ||
The ‘cyp3a4’ genes are duplicated on Chromosome 5/5L in the X. tropicalis and X. laevis.L subgenome. They are missing from/not present in the X.laevis.S subgenome. | The ‘cyp3a4’ genes are duplicated on Chromosome 5/5L in the X. tropicalis and X. laevis.L subgenome. They are missing from/not present in the X.laevis.S subgenome. | ||
The synteny is conserved as follows: | The synteny is conserved as follows: | ||
Xtrop. Chr5: cyb5r4 | Xtrop. Chr5: '''cyb5r4''' ... x ... '''cyp3a4.2 ... cyp3a4''' ... ripply2.2 ... ripply2.1 ... snap91 | ||
XlaChr5L: '''cyb5r4.L'''... LOC#3092(another''cyp''reg.region) ... '''cyp3a4.2.L''' ... LoC#3716(tmpo) ... '''cyp3a4.L''' ... Loc#16888(dram1) ... ripply2.2.L ... ripply2.1.L ... snap91.L | |||
Xla.Chr5S: cyb5r4.S … x … x … x… x … x … ripply2.2 ... ripply2.1 ... snap91 | Xla.Chr5S: cyb5r4.S … x … x … x… x … x … ripply2.2 ... ripply2.1 ... snap91 | ||
Human chr7:CYP3A7… CYP3AP2 … '''CYP3A4''' … CYP3A4(5’reg.region) [ enhancers] CYP3A137P …CYP3A43 … | |||
=nomenclature changes= | |||
09/20/2024 | |||
''Xenopus'' gene symbol changed from ''cyp3a4.1'' to ''cyp3a4'' | |||
Latest revision as of 08:31, 24 September 2024
cyp3a4
This is the community wiki page for the gene cyp3a4 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
synteny
The ‘cyp3a4’ genes are duplicated on Chromosome 5/5L in the X. tropicalis and X. laevis.L subgenome. They are missing from/not present in the X.laevis.S subgenome.
The synteny is conserved as follows:
Xtrop. Chr5: cyb5r4 ... x ... cyp3a4.2 ... cyp3a4 ... ripply2.2 ... ripply2.1 ... snap91
XlaChr5L: cyb5r4.L... LOC#3092(anothercypreg.region) ... cyp3a4.2.L ... LoC#3716(tmpo) ... cyp3a4.L ... Loc#16888(dram1) ... ripply2.2.L ... ripply2.1.L ... snap91.L
Xla.Chr5S: cyb5r4.S … x … x … x… x … x … ripply2.2 ... ripply2.1 ... snap91
Human chr7:CYP3A7… CYP3AP2 … CYP3A4 … CYP3A4(5’reg.region) [ enhancers] CYP3A137P …CYP3A43 …
nomenclature changes
09/20/2024
Xenopus gene symbol changed from cyp3a4.1 to cyp3a4