XB-FEAT-1020990: Difference between revisions

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Human name has changed for Entrez Gene: 64412. From GDNF-inducible zinc finger protein 1 to GDNF inducible zinc finger protein 1
Human name has changed for Entrez Gene: 64412. From GDNF-inducible zinc finger protein 1 to GDNF inducible zinc finger protein 1
=nomenclature notes=
06/19/21
Following assessment by David Webb at NCBI/REFSEQ,  a 2nd gzf1 gene may be a  tandem repeat in Xenopus and/or other amphibians, but is lost in placental mammals. If this 2nd gene, should it be annotated in new genome builds will be named GZF family member 2 (gzf2) ( HGNC approved).
See JIRA ticket RSCOM-108 [ https://ncbijira.ncbi.nlm.nih.gov/browse/RSCOM-108?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel]
'''the syntemy mapps are as follows:
'''
birds, crocodylians, turtles
NAPB>...'''GZF1<...GZF2<'''...CD93>...THBD>...SSTR4<
squamates
NAPB>...'''GZF1<...GZF2'''<...GABRP>
platypus, marsupials
CST-like<...NAPB>...'''GZF1<...GZF2<''' ...CD93>...THBD>...SSTR4<
placental mammals
CSTL1<...NAPB>...'''GZF1'''<...NXT1<...  ...CD93>...THBD>...SSTR4<
frogs { X tropicalis)
GPCPD1>...NAPB>...'''GZF1'''<...  ...CD93>...THBD>...SSTR4<
caecilians
GPCPD1>...NAPB>...'''GZF1<...GZF2<''' ...CD93>...THBD>...SSTR4<
Latimeria chalumnae
GPCPD1>...NAPB>...'''GZF1<...GZF2<''' ...GZF3<...  ...CD93>...THBD>...SSTR4<
Zfish(second gene possibly moved elsewhere in teleosts)
GPCPD1>...NAPB>...'''GZF1'''<//
reedfish, gar
GPCPD1>...NAPB>...'''GZF1<...GZF2'''< ...CD93>...THBD>...SSTR4<
thorny skate
GPCPD1>...NAPB>...'''GZF1<...GZF2<''' ...  ...CD93>...THBD>...SSTR4<
sea lamprey
SARS2<...NAPB>...'''GZF'''<...P2RY8-like<...P2RY8-like<...RIN2-like>

Latest revision as of 07:36, 17 June 2021

gzf1

This is the community wiki page for the gene gzf1 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase

nomenclature changes

04/22/ 2016

Human name has changed for Entrez Gene: 64412. From GDNF-inducible zinc finger protein 1 to GDNF inducible zinc finger protein 1

nomenclature notes

06/19/21 Following assessment by David Webb at NCBI/REFSEQ, a 2nd gzf1 gene may be a tandem repeat in Xenopus and/or other amphibians, but is lost in placental mammals. If this 2nd gene, should it be annotated in new genome builds will be named GZF family member 2 (gzf2) ( HGNC approved).

See JIRA ticket RSCOM-108 [ https://ncbijira.ncbi.nlm.nih.gov/browse/RSCOM-108?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel]

the syntemy mapps are as follows: birds, crocodylians, turtles NAPB>...GZF1<...GZF2<...CD93>...THBD>...SSTR4<

squamates NAPB>...GZF1<...GZF2<...GABRP>

platypus, marsupials CST-like<...NAPB>...GZF1<...GZF2< ...CD93>...THBD>...SSTR4<

placental mammals CSTL1<...NAPB>...GZF1<...NXT1<... ...CD93>...THBD>...SSTR4<

frogs { X tropicalis) GPCPD1>...NAPB>...GZF1<... ...CD93>...THBD>...SSTR4<

caecilians GPCPD1>...NAPB>...GZF1<...GZF2< ...CD93>...THBD>...SSTR4<

Latimeria chalumnae GPCPD1>...NAPB>...GZF1<...GZF2< ...GZF3<... ...CD93>...THBD>...SSTR4<

Zfish(second gene possibly moved elsewhere in teleosts) GPCPD1>...NAPB>...GZF1<//

reedfish, gar GPCPD1>...NAPB>...GZF1<...GZF2< ...CD93>...THBD>...SSTR4<

thorny skate GPCPD1>...NAPB>...GZF1<...GZF2< ... ...CD93>...THBD>...SSTR4<

sea lamprey SARS2<...NAPB>...GZF<...P2RY8-like<...P2RY8-like<...RIN2-like>