XB-FEAT-5956385: Difference between revisions

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=b3gat1=  
=b3gat1l=  
This is the community wiki page for the gene ''b3gat1'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
This is the community wiki page for the gene ''b3gat1l'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
 
=nomenclature changes=
On September 26, 2018
 
Gene name for XB-GENE-5956386  beta-1,3-glucuronyltransferase 1 (b3gat1) was changed to beta-1,3-glucuronyltransferase 1 '''like''' ('''''b3gat1l''''').
 
B3GAT1-like gene lost along with a neighboring B4GALT-like gene in mammals.
 
Orthology to human B3GAT1 remains. There is no ortholog in zebrafish.
 
'''synteny notes:'''
 
archelosaurs, amphibians
TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4<...TMEM39A>...FAAHL<...CHD1L>
 
squamates
TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4< ...SMAD9>...RFXAP<
 
mammals (lost)
TEX55>...UPK1B>...B4GALT4<...ARHGAP31>...TMEM39A<
 
gar
UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4< ...TAF13<...CASR
 
reedfish
TEX55>...UPK1B>...ARHGAP31<...B4GALT3L>...B4GALT4< ...MTMR2>
 
teleosts
TEX55> ...ARHGAP31<...B4GALT4< ...CASR<  *I don't think B3GATL and B4GALT3L moved elsewhere.
 
chondrichthyes
TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT4>...DRD3> *B4GALT3L may have moved between NOX4 and FOLH1B
 
 
02.27.2021
Gene name still under review:  beta-1,3-glucuronyltransferase 1like (''b3gat1l''), waiting for HGNC approval.

Latest revision as of 11:53, 26 February 2021

b3gat1l

This is the community wiki page for the gene b3gat1l please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase

nomenclature changes

On September 26, 2018

Gene name for XB-GENE-5956386 beta-1,3-glucuronyltransferase 1 (b3gat1) was changed to beta-1,3-glucuronyltransferase 1 like (b3gat1l).

B3GAT1-like gene lost along with a neighboring B4GALT-like gene in mammals.

Orthology to human B3GAT1 remains. There is no ortholog in zebrafish.

synteny notes:

archelosaurs, amphibians TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4<...TMEM39A>...FAAHL<...CHD1L>

squamates TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4< ...SMAD9>...RFXAP<

mammals (lost) TEX55>...UPK1B>...B4GALT4<...ARHGAP31>...TMEM39A<

gar UPK1B>...ARHGAP31<...B3GATL>...B4GALT3L>...B4GALT4< ...TAF13<...CASR

reedfish TEX55>...UPK1B>...ARHGAP31<...B4GALT3L>...B4GALT4< ...MTMR2>

teleosts TEX55> ...ARHGAP31<...B4GALT4< ...CASR< *I don't think B3GATL and B4GALT3L moved elsewhere.

chondrichthyes TEX55>...UPK1B>...ARHGAP31<...B3GATL>...B4GALT4>...DRD3> *B4GALT3L may have moved between NOX4 and FOLH1B


02.27.2021 Gene name still under review: beta-1,3-glucuronyltransferase 1like (b3gat1l), waiting for HGNC approval.