XB-FEAT-959229: Difference between revisions
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=mical2= | =mical2= | ||
This is the community wiki page for the gene ''mical2'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | This is the community wiki page for the gene ''mical2'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | ||
=nomenclature changes= | |||
Following a review of genome annotation by the NCBI refseq project, the human gene MICAL2 (upstream) and MICALCL (downstream) have been merged. | |||
See: JIRA ticket RSCOMM-156 for details [https://ncbijira.ncbi.nlm.nih.gov/browse/RSCOM-156] | |||
Subsequently, Xenbase has merged these two gene pages/gene models as well, taking the following steps: | |||
1) we will delete the MICALCL gene page: XB-GENEPAGE-959787 | |||
''micalcl'' will be added as a synonym of ''mical2'' | |||
2) keep the MICAL2 gene page, XB-GENEPAGE-959229 | |||
gene symbol: mical2 | |||
gene name: microtubule associated monooxygenase, calponin and LIM domain containing 2 | |||
Note that previous name for the LOCs in X.laevis was "F-actin-monooxygenase mical2-like" | |||
3) update model to v10 for X. tropicalis: XB-GENE-959230 Entrez GeneID:100487018 | |||
new v10 gene model: XBXT10g002637 ( chromosome 4) | |||
4) Add v9.2 X. laevis.L gene model: gene49084 | |||
X. laevis XB-GENE-6486853 (mical2.L) | |||
Entrez GeneID:108713737 | |||
5)Add v9.2 X. laevis.S gene model :gene32160 | |||
X. laevis XB-GENE-17343703 (mical2.S) | |||
Entrez GeneID:108715283 | |||
Latest revision as of 06:44, 8 February 2023
mical2
This is the community wiki page for the gene mical2 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature changes
Following a review of genome annotation by the NCBI refseq project, the human gene MICAL2 (upstream) and MICALCL (downstream) have been merged. See: JIRA ticket RSCOMM-156 for details [1]
Subsequently, Xenbase has merged these two gene pages/gene models as well, taking the following steps:
1) we will delete the MICALCL gene page: XB-GENEPAGE-959787
micalcl will be added as a synonym of mical2
2) keep the MICAL2 gene page, XB-GENEPAGE-959229
gene symbol: mical2
gene name: microtubule associated monooxygenase, calponin and LIM domain containing 2
Note that previous name for the LOCs in X.laevis was "F-actin-monooxygenase mical2-like"
3) update model to v10 for X. tropicalis: XB-GENE-959230 Entrez GeneID:100487018
new v10 gene model: XBXT10g002637 ( chromosome 4)
4) Add v9.2 X. laevis.L gene model: gene49084 X. laevis XB-GENE-6486853 (mical2.L) Entrez GeneID:108713737
5)Add v9.2 X. laevis.S gene model :gene32160 X. laevis XB-GENE-17343703 (mical2.S) Entrez GeneID:108715283