XB-FEAT-1007199: Difference between revisions
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=tmem86a= | =''tmem86a''= | ||
This is the community wiki page for the gene ''tmem86a'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | This is the community wiki page for the gene ''tmem86a'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. | ||
=gene model annotation= | |||
The ''X. tropicalis'' gene on Chr7 is not the true paralog of the ''X.laevis tmem86a.L'', and is being moved to a new gene page, and renamed ''tmem86al (transmembrane protein 86a like)''. | |||
Synteny supports ''X. tropicalis'' gene ''LOC100135356'' as the true ''tmem86a'' gene. | |||
=synteny= | |||
'''true ''tmem86a (transmembrane protein 86a)'' orthology is supported by synteny against Human and Mouse.''' | |||
Xtrop ch4: LOC101734942|ptprj< ptpn5< '''LOC100135356/tmem86a'''< spty2dl> ueeld> | |||
Xla.Chr4.L:LOC108713433|ptprj< LOC108713695|ptpn5< '''tmem86a.L'''< spty2dl.L> ueeld.L> | |||
HsaChr11: srsf3p1> LoC> '''tmem86a'''> igsf22< ptpn5< LOC|cdk7enhancer | |||
MmuChr7: spty2d1< gm#> '''tmem86a'''> ptpn5< | |||
''Xenopus tmem86al (transmembrane protein 86a like)'' | |||
Xtrop chr7: ptprh< '''tmem86a'''< LOC101733917> LOC105945156> brsk1< hspbp1> pppr6r1> | |||
Xla chr7L: ptprh.L< '''LOC108696764|tmem86.L'''< pppr6r1.L< hspbp1.L< | |||
Xla chr7S: snrnp70.S> ptprh.S< '''LOC108697992|tmem86al.S'''< | |||
Latest revision as of 06:53, 17 April 2023
tmem86a
This is the community wiki page for the gene tmem86a please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
gene model annotation
The X. tropicalis gene on Chr7 is not the true paralog of the X.laevis tmem86a.L, and is being moved to a new gene page, and renamed tmem86al (transmembrane protein 86a like).
Synteny supports X. tropicalis gene LOC100135356 as the true tmem86a gene.
synteny
true tmem86a (transmembrane protein 86a) orthology is supported by synteny against Human and Mouse.
Xtrop ch4: LOC101734942|ptprj< ptpn5< LOC100135356/tmem86a< spty2dl> ueeld>
Xla.Chr4.L:LOC108713433|ptprj< LOC108713695|ptpn5< tmem86a.L< spty2dl.L> ueeld.L>
HsaChr11: srsf3p1> LoC> tmem86a> igsf22< ptpn5< LOC|cdk7enhancer
MmuChr7: spty2d1< gm#> tmem86a> ptpn5<
Xenopus tmem86al (transmembrane protein 86a like)
Xtrop chr7: ptprh< tmem86a< LOC101733917> LOC105945156> brsk1< hspbp1> pppr6r1>
Xla chr7L: ptprh.L< LOC108696764|tmem86.L< pppr6r1.L< hspbp1.L<
Xla chr7S: snrnp70.S> ptprh.S< LOC108697992|tmem86al.S<