XB-FEAT-5922621: Difference between revisions
imported>Xenbase →noxo1.1: Updated nomenclature, replaced: unnamed → noxo1.1 (2) |
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=noxo1. | =noxo1.2= | ||
This is the community wiki page for the gene ''noxo1. | This is the community wiki page for the gene ''noxo1.2'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | ||
=nomenclature change= | |||
On review by Xenbase curators, this gene was renamed ''noxo1.2, NADPH oxidase organizer 1 gene 2'' as it appears to be a tandem duplication of ''noxo1'' on Chromosome 9/9_10 in ''Xenopus''. | |||
In the current genome annotations, the synteny pattern is as follows. | |||
Xtrop. v10.o Chr 9: gfer < ... '''noxo1.1''' > ... LOC101733866 > ... XB5835757> ... gng13> ... | |||
[where LOC101733866 = NADPH oxidase organizer 1-like [ Xenopus tropicalis (tropical clawed frog) ] | |||
Gene ID: 101733866] and | |||
where XB5835757 =uncharacterized XB5835757 Gene ID: 779553] | |||
in reverse order, synteny pattern in X laevis is as follows: | |||
Xlav. v10 Chr9_10.L: XB5835757.L< ... LOC108701676< ... '''noxo1.1.L'''< ... gfer.L> [[LOC121397979]]> | |||
where LOC108701676 = NADPH oxidase organizer 1 | |||
where [[LOC121397979]] unconventional myosin-XV-like | |||
and XB5835757.L is uncharacterized XB5835757 L homeolog Gene ID: 100158433] | |||
Xla. v10 Chr9_10.S: gng13.S< ... XB5835757.S< ... '''noxo1.1.S'''< ... [[LOC108703232]].S>.... alkbh5.S> | |||
[ where XB5835757.S is uncharacterized XB5835757 S homeolog Gene ID: 108703230 | |||
and where | |||
[[LOC108703232]] = unconventional myosin-XV-like Gene ID: 108703232] | |||
Revision as of 15:14, 9 August 2021
noxo1.2
This is the community wiki page for the gene noxo1.2 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature change
On review by Xenbase curators, this gene was renamed noxo1.2, NADPH oxidase organizer 1 gene 2 as it appears to be a tandem duplication of noxo1 on Chromosome 9/9_10 in Xenopus.
In the current genome annotations, the synteny pattern is as follows.
Xtrop. v10.o Chr 9: gfer < ... noxo1.1 > ... LOC101733866 > ... XB5835757> ... gng13> ...
[where LOC101733866 = NADPH oxidase organizer 1-like [ Xenopus tropicalis (tropical clawed frog) ] Gene ID: 101733866] and
where XB5835757 =uncharacterized XB5835757 Gene ID: 779553]
in reverse order, synteny pattern in X laevis is as follows:
Xlav. v10 Chr9_10.L: XB5835757.L< ... LOC108701676< ... noxo1.1.L< ... gfer.L> LOC121397979>
where LOC108701676 = NADPH oxidase organizer 1
where LOC121397979 unconventional myosin-XV-like
and XB5835757.L is uncharacterized XB5835757 L homeolog Gene ID: 100158433]
Xla. v10 Chr9_10.S: gng13.S< ... XB5835757.S< ... noxo1.1.S< ... LOC108703232.S>.... alkbh5.S>
[ where XB5835757.S is uncharacterized XB5835757 S homeolog Gene ID: 108703230
and where
LOC108703232 = unconventional myosin-XV-like Gene ID: 108703232]