XB-FEAT-5757685: Difference between revisions
imported>Xenbase |
imported>Xenbase |
||
| Line 5: | Line 5: | ||
this gene model of a nonclassical MHC class Ib gene was named ''snc13.2'' following data published in XB-ART-42392 (Goyos and Robert 2010). | this gene model of a nonclassical MHC class Ib gene was named ''snc13.2'' following data published in XB-ART-42392 (Goyos and Robert 2010). | ||
the co-ordinates for ''snc13.2'' are:Chr08:112653270..112667938 (- strand) | Note that this gene model is from the X tropicalis v9.1 geneome build, the co-ordinates for ''snc13.2'' are:Chr08:112653270..112667938 (- strand), and does not appear as a named model in the v10.0 Xtrop genome, but is probably represented by an unnamed LOC model in V10.0 | ||
Note that the 2002 sequence submitted with NCBI [Reference Sequence: NM_001247995.1 ] is called major histocompatibility complex nonclassical class Ib-2 (mhc1b2), transcript variant 1, mRNA. | Note also that the 2002 sequence submitted with NCBI [Reference Sequence: NM_001247995.1 ] is called major histocompatibility complex nonclassical class Ib-2 (mhc1b2), transcript variant 1, mRNA. Xenbase has represented a second distinct gene model at mhc1b2 from Xtrop v10.0 (Chr8:134101867..134116517 (- strand)) on a different gene page: XB-GENEPAGE-484710, which is surrounded by numerous uncharacterized LOC# models | ||
Xenbase has represented a second distinct gene model at mhc1b2 (Chr8:134101867..134116517 (- strand)) on a different gene page: XB-GENEPAGE-484710, which is surrounded by numerous uncharacterized LOC# models | |||
Latest revision as of 07:40, 2 April 2021
snc13.2
This is the community wiki page for the gene snc13.2 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature changes
7/22/2019 this gene model of a nonclassical MHC class Ib gene was named snc13.2 following data published in XB-ART-42392 (Goyos and Robert 2010).
Note that this gene model is from the X tropicalis v9.1 geneome build, the co-ordinates for snc13.2 are:Chr08:112653270..112667938 (- strand), and does not appear as a named model in the v10.0 Xtrop genome, but is probably represented by an unnamed LOC model in V10.0
Note also that the 2002 sequence submitted with NCBI [Reference Sequence: NM_001247995.1 ] is called major histocompatibility complex nonclassical class Ib-2 (mhc1b2), transcript variant 1, mRNA. Xenbase has represented a second distinct gene model at mhc1b2 from Xtrop v10.0 (Chr8:134101867..134116517 (- strand)) on a different gene page: XB-GENEPAGE-484710, which is surrounded by numerous uncharacterized LOC# models