XB-FEAT-22172581: Difference between revisions
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The true ortholog of human DTX3 is ''Xenopus'' ''dtx3'' Gene ID: 2217250, on Chromosome 2, based on conserved gene order/synteny | The true ortholog of human DTX3 is ''Xenopus'' ''dtx3'' Gene ID: 2217250, on Chromosome 2, based on conserved gene order/synteny | ||
The true ortholog of human DTX3L is ''Xenopus'' ''dtx3l'' Gene ID:100496352, based on conserved gene order/synteny, is annotated on Scaffold 734 in Xtrop v9.1 () gene model '''gene26586''', and in ''X. laevis'' v9.2 is on Chr9-10 (dtx3l.L gene ID:108701239; dtx3l.S gene ID:108702882). Currently there is no Xenbase gene page for these genes, and the vertebrate orthologs need to be moved to the correct gene pages. Note that the L human in the gene DTX3L, doesn't appear stand for 'like' as it would in a ''Xenopus'' gene name. | The true ortholog of human DTX3L is ''Xenopus'' ''dtx3l'' Gene ID:100496352, based on conserved gene order/synteny, is annotated on Scaffold 734 in Xtrop v9.1 () gene model '''gene26586''', and in ''X. laevis'' v9.2 is on Chr9-10 (dtx3l.L gene ID:108701239; dtx3l.S gene ID:108702882). Currently there is no Xenbase gene page for these genes, and the vertebrate orthologs need to be moved to the correct gene pages. | ||
Note that the L human in the gene DTX3L, doesn't appear stand for 'like' as it would in a ''Xenopus'' gene name. | |||
Following this analysis, we have reverted name for this gene to ''dtex3-like, deltex E3 ubiquitin ligase 3-like''. | Following this analysis, we have reverted name for this gene to ''dtex3-like, deltex E3 ubiquitin ligase 3-like''. | ||
Updated orthologs to human mouse fly and zebrafish: (coming soon) | Updated orthologs to human mouse fly and zebrafish: (coming soon) | ||
Revision as of 07:20, 19 August 2020
dtx3-like
This is the community wiki page for the gene dtx3-like please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature changes
1.3.2020 :gene page created for dtx3-like
6.30.20: Following Entrz report:
Human symbol has changed for genepage ID: 22172581 From dtx3-like to DTX3
Human name has changed for genepage ID: 22172581 From deltex 3, E3 ubiquitin ligase-like to deltex E3 ubiquitin ligase 3
8.19.2020: Sorry for any confusion- this gene is infact the dtx3-like gene on Chromsome 8 in Xenopus, in this gene order: cd163> cd5l> cd163 dtx3-like< LOC#(vm2r26)< LOC#(gprc6a) <
WARNING: there are 2 other deltex 3 genes in human and Xenopus- dtx3, and dtx3L.
The true ortholog of human DTX3 is Xenopus dtx3 Gene ID: 2217250, on Chromosome 2, based on conserved gene order/synteny
The true ortholog of human DTX3L is Xenopus dtx3l Gene ID:100496352, based on conserved gene order/synteny, is annotated on Scaffold 734 in Xtrop v9.1 () gene model gene26586, and in X. laevis v9.2 is on Chr9-10 (dtx3l.L gene ID:108701239; dtx3l.S gene ID:108702882). Currently there is no Xenbase gene page for these genes, and the vertebrate orthologs need to be moved to the correct gene pages.
Note that the L human in the gene DTX3L, doesn't appear stand for 'like' as it would in a Xenopus gene name.
Following this analysis, we have reverted name for this gene to dtex3-like, deltex E3 ubiquitin ligase 3-like.
Updated orthologs to human mouse fly and zebrafish: (coming soon)