XB-FEAT-1217487: Difference between revisions
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=cel.2= | =''cel.2''= | ||
This is the community wiki page for the gene ''cel.2'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in | This is the community wiki page for the gene ''cel.2'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbas. | ||
e | |||
=nomenclature updates and changes= | |||
1.3.20 This is a tandem duplication. Based on synteny the following changes were made: | 1.3.20 This is a tandem duplication. Based on synteny the following changes were made: | ||
*nomenclature change from cel to cel.2 | |||
*Gene page for cel.1 created. | *nomenclature change from ''cel'' to ''cel.2'' | ||
*gene1801 model (entrez 380547 ) added to cel.2.S | *Gene page for ''cel.1'' created. | ||
*trop model changed from gene2995 (entrez ID 100144991) to gene4839 (entrez ID 100492444) | *gene1801 model (entrez 380547 ) added to cel.2.S gene page | ||
*X.trop model changed from gene2995 (entrez ID 100144991) to gene4839 (entrez ID 100492444) | |||
=notes on synteny= | |||
''cel.1'' and ''cel.2'' represent a tandem duplication fo ''cel'' gene in ''X. tropicalis.'' | |||
In the v10.0 Xtr. genome model:gene2995 (Entrez ID 100144991) is ''cel.1'', and model gene4839 (Entrez ID 100492444) is ''cel.2'' | |||
They occur in this pattern on Chr8: gfi1b> gtf3c5> '''''cel.1'''''> '''''cel.2'''''> ralgds< rna> swi5> ubl4a< | |||
Revision as of 15:04, 1 April 2021
cel.2
This is the community wiki page for the gene cel.2 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbas. e
nomenclature updates and changes
1.3.20 This is a tandem duplication. Based on synteny the following changes were made:
- nomenclature change from cel to cel.2
- Gene page for cel.1 created.
- gene1801 model (entrez 380547 ) added to cel.2.S gene page
- X.trop model changed from gene2995 (entrez ID 100144991) to gene4839 (entrez ID 100492444)
notes on synteny
cel.1 and cel.2 represent a tandem duplication fo cel gene in X. tropicalis.
In the v10.0 Xtr. genome model:gene2995 (Entrez ID 100144991) is cel.1, and model gene4839 (Entrez ID 100492444) is cel.2
They occur in this pattern on Chr8: gfi1b> gtf3c5> cel.1> cel.2> ralgds< rna> swi5> ubl4a<