XB-FEAT-22065613: Difference between revisions
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the 2 other ''X. tropicalis'' genes have been given provisional names '' | the 2 other ''X. tropicalis'' genes have been given provisional names ''sprtn like gene 2''[geneID: 105945677) and ''sprtn like gene 3'' [geneID: 105948375] | ||
X. trop chr1: jsprp1> ...amh< ...sf3a2< ... plekhj1> ... dot1l> ... '''''' | X. trop chr1: jsprp1> ...amh< ...sf3a2< ... plekhj1> ... dot1l> ... ''''''sprtnl2''''''> ... ap3d1> ... mob3a> ... mknk2> ... btbd2> ... csnk1g2< ... | ||
X. trop chr9: gng13> ... chtf18< ... rpusd1> ... msin< ... '''''' | X. trop chr9: gng13> ... chtf18< ... rpusd1> ... msin< ... ''''''sprtnl3''''''< ... LOC#3326> ... LOC#3470 ... | ||
Revision as of 16:31, 14 March 2023
sprtn3
This is the community wiki page for the gene sprtn3, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
nomenclature changes
05JAN2023
GENE NAME CHANGED FROM provisional ortholog of SprT-like N-terminal domain TO SprT-like N-terminal domain like
GENE SYMBOL CHANGED FROM XB22065613 [provisional:sprtn] TO sprtn3l
both gene name and symbol are (provisional) awaiting HGNC/NCBI Ref Seq approval.
synteny
X. laevis sprtn.S on Chromosome 5.S seems to be the true orthology of human SPRTN, with both being flanked by eglin1 and exoc8.
Human chr 1: RNA5SP80< ... EXOC8< ... SPRTN> ...LOC107985360> ... EGLN1< ...LOC122152336>
X. laevis chr5.S: sf3b5.S< ... exoc8.S< ...tsnax.S< ... egln1.S< .. sprtn.S> ... acta1.S< ... LOC108717893< ...
the 2 other X. tropicalis genes have been given provisional names sprtn like gene 2[geneID: 105945677) and sprtn like gene 3 [geneID: 105948375]
X. trop chr1: jsprp1> ...amh< ...sf3a2< ... plekhj1> ... dot1l> ... 'sprtnl2'> ... ap3d1> ... mob3a> ... mknk2> ... btbd2> ... csnk1g2< ...
X. trop chr9: gng13> ... chtf18< ... rpusd1> ... msin< ... 'sprtnl3'< ... LOC#3326> ... LOC#3470 ...