XB-FEAT-6071789: Difference between revisions
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04APRIL2023 | 04APRIL2023 | ||
Despite suggestions from DIOPT Analysis, this gene is not orthologous with | Despite suggestions from DIOPT Analysis, this gene is not orthologous with human KDRL. | ||
In Xtrop and in Zebrafish, ''kdrl'' is adjacent to ''chic1'' and ''cdx4'', whereas flt1 is flanked by ''slc46a3'' and ''pan3'' | |||
There does not appear to be an orthologous human gene for ''flt1'' | |||
There does '''not''' appear to be an orthologous human gene for ''flt1'' ( I missing in human and other mammals) | |||
=synteny= | |||
Synteny across ''Xenopus'' is highly conserved: | Synteny across ''Xenopus'' is highly conserved: | ||
''Xtrop: mtus2 > | ''Xtrop: mtus2 > [LOC#9015(p) LOC#9139(unch) LOC(unch) LOC#9957] '''flt1'''> pan3< flt3>'' | ||
''Xla.L : mtus2.L > slc46a3.L flt1.L> pan3.L< flt3.L>'' | ''Xla.L : mtus2.L > slc46a3.L '''flt1.L>''' pan3.L< flt3.L>'' | ||
''Xla.S : mtus2.S > slc46a3.S flt1.S> pan3.S< flt3.S>'' | ''Xla.S : mtus2.S > slc46a3.S '''flt1.S>''' pan3.S< flt3.S>'' | ||
Revision as of 08:28, 25 April 2023
flt1
This is the community wiki page for the gene flt1 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
orthology and synteny notes
04APRIL2023
Despite suggestions from DIOPT Analysis, this gene is not orthologous with human KDRL.
In Xtrop and in Zebrafish, kdrl is adjacent to chic1 and cdx4, whereas flt1 is flanked by slc46a3 and pan3
There does not appear to be an orthologous human gene for flt1 ( I missing in human and other mammals)
synteny
Synteny across Xenopus is highly conserved:
Xtrop: mtus2 > [LOC#9015(p) LOC#9139(unch) LOC(unch) LOC#9957] flt1> pan3< flt3>
Xla.L : mtus2.L > slc46a3.L flt1.L> pan3.L< flt3.L>
Xla.S : mtus2.S > slc46a3.S flt1.S> pan3.S< flt3.S>