XB-FEAT-5721986: Difference between revisions
imported>Xenbase →loc100489485: Updated nomenclature, replaced: unnamed → loc100489485 (2) |
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=loc100489485= | =loc100489485= | ||
This is the community wiki page for the gene ''loc100489485'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | This is the community wiki page for the gene ''loc100489485'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. | ||
=DIOPT/EggNog homology group analysis= | |||
used this protein sequence | |||
cell cycle regulator of non-homologous end joining [Xenopus tropicalis] | |||
NCBI Reference Sequence: XP_002941474.3 | |||
>XP_002941474.3 cell cycle regulator of non-homologous end joining [Xenopus tropicalis] | |||
MSELTLMLFIPSSICIDVYSILFRAMETVESKGKKRVLPEWMKEENVGTNISSTKNLKRKKENSSPKRLT | |||
VYCMNERELVACALEILSEEKRRNASDMAAITEASEDQQSGESQATSPANQTSSPEVVPSTSKAPTVPET | |||
DSDSDDDALRLIREIFFT | |||
results: matched 71 proteins/species with high confidence: Go:MF negative regulation of double-strand break repair via nonhomologous end joining. | |||
Most proteins were assigned the symbol '''C7orf49''', with Human orthology called '''CYREN''', cell cycle regulator of NHEJ. | |||
based on this simple analysis, this ''Xenopus'' gene has been renamed ''cyren'', cell cycle regulator of NHEJ. | |||
Revision as of 10:37, 25 April 2023
loc100489485
This is the community wiki page for the gene loc100489485 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
DIOPT/EggNog homology group analysis
used this protein sequence cell cycle regulator of non-homologous end joining [Xenopus tropicalis]
NCBI Reference Sequence: XP_002941474.3
>XP_002941474.3 cell cycle regulator of non-homologous end joining [Xenopus tropicalis] MSELTLMLFIPSSICIDVYSILFRAMETVESKGKKRVLPEWMKEENVGTNISSTKNLKRKKENSSPKRLT VYCMNERELVACALEILSEEKRRNASDMAAITEASEDQQSGESQATSPANQTSSPEVVPSTSKAPTVPET DSDSDDDALRLIREIFFT
results: matched 71 proteins/species with high confidence: Go:MF negative regulation of double-strand break repair via nonhomologous end joining.
Most proteins were assigned the symbol C7orf49, with Human orthology called CYREN, cell cycle regulator of NHEJ.
based on this simple analysis, this Xenopus gene has been renamed cyren, cell cycle regulator of NHEJ.