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28 March 2024
- 13:2013:20, 28 March 2024 diff hist +4 XB-FEAT-5824117 →tff2
- 13:2013:20, 28 March 2024 diff hist +586 XB-FEAT-5824117 →tff2
- 13:1413:14, 28 March 2024 diff hist −2 XB-FEAT-1018553 →gene annotation notes current
- 13:1213:12, 28 March 2024 diff hist −154 XB-FEAT-22041699 →gene annotation notes current Tags: Replaced Manual revert
- 13:1013:10, 28 March 2024 diff hist +154 XB-FEAT-22041699 →fim-a.1 Tag: Reverted
- 13:0713:07, 28 March 2024 diff hist +427 XB-FEAT-1018553 →fgfr1
- 12:4912:49, 28 March 2024 diff hist +2,610 XB-FEAT-29091430 →nomenclature changes current
- 12:4912:49, 28 March 2024 diff hist +2,906 XB-FEAT-22067945 →nomenclature changes current
- 12:4812:48, 28 March 2024 diff hist +2,610 XB-FEAT-6492177 →nomenclature changes current
- 12:4512:45, 28 March 2024 diff hist +23 XB-FEAT-29097506 →Nomenclature updates current
- 12:4412:44, 28 March 2024 diff hist +23 XB-FEAT-29097510 →Nomenclature updates current
- 12:4112:41, 28 March 2024 diff hist +3,422 N XB-FEAT-29097510 Created page with "=''pgla.4''= This is the Xenbase wiki page for ''Xenopus'' ''pgla.4'' genes. Please record here anything that is not captured elsewhere on Xenbase. =Nomenclature updates= 28MARCH2024 The ‘’Xenopus’’ ‘’pgla’’ genes on Chr6/6L/6S, a cluster of tadem uncharacterized proteins, were assessed by Xenbase curators. Based on synteny, protein alignment and phylogenetic analysis, the following provisional gene nomenclature was decided upon. Note that in the v10..."
- 12:4112:41, 28 March 2024 diff hist +3,422 N XB-FEAT-29097506 Created page with "=''pgla.5''= This is the Xenbase wiki page for ''Xenopus'' ''pgla.5'' genes. Please record here anything that is not captured elsewhere on Xenbase. =Nomenclature updates= 28MARCH2024 The ‘’Xenopus’’ ‘’pgla’’ genes on Chr6/6L/6S, a cluster of tadem uncharacterized proteins, were assessed by Xenbase curators. Based on synteny, protein alignment and phylogenetic analysis, the following provisional gene nomenclature was decided upon. Note that in the v10..."
- 08:4608:46, 28 March 2024 diff hist −13 XB-FEAT-29091430 →nomenclature changes
- 08:2708:27, 28 March 2024 diff hist +882 N XB-FEAT-29091430 Created page with "=''pgla.3''= This is the Xenbase wiki page for the ''Xenopus pgla.3'' genes. Feel free to record here any information about this genes that is not captured else where on Xenbase. =nomenclature changes= 28March2024 Following a quick assessment of the v10 NCBI annotation for X. laevis on chr6L, there appears to be a duplication of 3 ''pgla'' genes. Xla.chr6L: ulk4.L< trak1.L> '''LOC121394631.L(‘pgla-like’)< LOC780753.L(‘pgla.S’)< pgla.L<''' pgq.L< >levi.L..."
- 08:2408:24, 28 March 2024 diff hist +882 N XB-FEAT-6492177 Created page with "=''pgla''= This is the Xenbase wiki page for the ''Xenopus'' ''pgla'' genes. Feel free to record here any information about this genes that is not captured else where on Xenbase. =nomenclature changes= 28March2024 Following a quick assessment of the v10 NCBI annotation for X. laevis on chr6L, there appears to be a duplication of 3 ''pgla'' genes. Xla.chr6L: ulk4.L< trak1.L> '''LOC121394631.L(‘pgla-like’)< LOC780753.L(‘pgla.S’)< pgla.L<''' pgq.L< >levi.L..."
- 08:1308:13, 28 March 2024 diff hist +573 N XB-FEAT-22067945 Created page with "=''pgla.2''= This is the Xenbase wiki page for the Xenopus genes ''pgla.2''. Feel free to records here any information about these genes that is not captured elsewhere on Xenbase. =nomenclature changes= 28MARCH2024 In the v10 ''X.laevis'' NCBI annotation, this gene was incorrectly called ''pgla.S'', but it '''is placed on chromosome 6L'''. Synteny and the NCBI annotation name is as a prepro-PGLa, and as it falls adjacent to other prepro-PGLa genes, we have given it..."
- 07:1607:16, 28 March 2024 diff hist +250 XB-FEAT-967821 →gene annotation notes current
- 06:5006:50, 28 March 2024 diff hist +129 XB-FEAT-967821 →gene annotation notes
- 06:4406:44, 28 March 2024 diff hist +42 XB-FEAT-967821 →gene annotation notes
- 06:4106:41, 28 March 2024 diff hist +160 XB-FEAT-967821 →gene annotation notes
27 March 2024
- 13:2213:22, 27 March 2024 diff hist +29 XB-FEAT-967821 →gene annotation notes
- 13:1813:18, 27 March 2024 diff hist +89 XB-FEAT-967821 →gene annotation notes
- 13:1613:16, 27 March 2024 diff hist +1,016 XB-FEAT-967821 →aadacl4
- 12:5412:54, 27 March 2024 diff hist −3 XB-FEAT-949454 →synteny from different genome releases & annotation notes current
- 12:5312:53, 27 March 2024 diff hist +14 XB-FEAT-949454 →synteny from different genome releases & annotation notes
- 12:5312:53, 27 March 2024 diff hist +887 XB-FEAT-949454 →nomenclature changes
- 12:1412:14, 27 March 2024 diff hist +3 XB-FEAT-949454 →trat1
- 12:0812:08, 27 March 2024 diff hist −2 XB-FEAT-485843 →annotation in earlier genome assemblies and synteny for Xenopus hoxd11 genes current
- 12:0812:08, 27 March 2024 diff hist +1,690 XB-FEAT-485203 →hoxd10 current
- 12:0612:06, 27 March 2024 diff hist 0 XB-FEAT-485843 →synteny patterns/annoations
- 12:0312:03, 27 March 2024 diff hist +1,756 XB-FEAT-485843 →hoxd11
- 11:1611:16, 27 March 2024 diff hist +5 XB-FEAT-485203 →hoxd10
18 March 2024
- 10:4110:41, 18 March 2024 diff hist 0 XB-FEAT-1000743 →nomenclature changes current
- 10:3910:39, 18 March 2024 diff hist −115 XB-FEAT-5794174 →gene function current
- 10:3410:34, 18 March 2024 diff hist +479 XB-FEAT-1013156 →ccdc96 current
- 10:2910:29, 18 March 2024 diff hist +490 XB-FEAT-6258447 →ccdc153 current
- 10:2510:25, 18 March 2024 diff hist +201 XB-FEAT-6073409 →ube2ql1 current
- 10:2110:21, 18 March 2024 diff hist +206 XB-FEAT-5813559 →nomenclature changes current
- 10:1910:19, 18 March 2024 diff hist +4 XB-FEAT-1004740 →cnih current
- 10:1910:19, 18 March 2024 diff hist +171 XB-FEAT-1004740 →cnih
- 10:1810:18, 18 March 2024 diff hist +156 XB-FEAT-1002678 →dnase1l3 current
- 10:1410:14, 18 March 2024 diff hist +129 XB-FEAT-997015 →agmat current
- 10:0510:05, 18 March 2024 diff hist +331 XB-FEAT-993716 →cnih4 current
- 10:0310:03, 18 March 2024 diff hist +179 XB-FEAT-489935 →fnta current
- 09:5609:56, 18 March 2024 diff hist +345 XB-FEAT-494042 →fntb current
14 March 2024
- 10:4010:40, 14 March 2024 diff hist +488 XB-FEAT-5935727 →unnamed current
- 10:2910:29, 14 March 2024 diff hist +392 XB-FEAT-5870894 →loc432289 current
- 10:0010:00, 14 March 2024 diff hist +392 N XB-FEAT-29098766 Created page with "=''LOC116412415'' = This is the community wiki page for ''LOC116412415''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =annotation notes= 13MARCH2024 Xenbase curators updated the gene name for this protein, from uncharacterized to 'myb DNA binding protein 5', after searching for orthologs groups (OG) in DIOPTs EggNogg6.0 tool." current
- 08:1508:15, 14 March 2024 diff hist +853 XB-FEAT-6040024 →cyp2e1 current