XB-FEAT-5740333

linc02867

This is the community wiki page for the gene linc02867 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase

nomenclature changes

12/05/2016

Human symbol has changed for genepage ID: 5740333 From loc440330 to loc105371184

10.18.2019

Human symbol has changed for Entrez Gene: 105371184. From LOC105371184 to linc02867

10.FEB.2021

Human symbol has changed for genepage ID: 5740333 From linc02867 to STUB1-DT, STUB1 divergent transcript . a psuedo gene in Humans.

XB curators decided to keep this gene name as is, unchanged, as a lncRNA, as it appears it is functional in Xenopus. Note there is no gene in Xla.S

Do not change unless further compelling evidence is presented/published.

synteny maps

07JUNE2023

Xtr: linc02867< stub1> jmjd8<. XB5729975< LOC100487504[trim25]<

Xla.L LOC108701691[trim25] jmjd8.L> stub1.L> loc440330.L(gene30787) rhbdl1.L<

Xla.S XB5729975> stub1.S< rhbdl1.S< (note: not present in S)

Human: ROT2> LOC#> RHBDL1> STUB-DT<. STUB1> JMJD8<. WDR24<

Notes: Although Human STUB-DT1 and the Xenopus linc02867/loc440330 are both flanked by STUVB1 and RHBDL1, these are not the same/orthologous genes.

NCBI also doesnt identify eitehr Xenopus gene as orthols of STUB_DT1- mentioning on 3 orthog ( in hedgehog opossuma nd green anole). XB has therefore remove the human STUB-DT1 [Gene ID: 105371184] from this gene page.