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A user with 806 edits. Account created on 11 March 2022.
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10 October 2024

9 October 2024

8 October 2024

  • 11:0311:03, 8 October 2024 diff hist +432‎ N XB-FEAT-29077014 ‎ Created page with "=''ccdc142''= This is the community wiki page for the ''Xenopus ccdc142'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 02OCT2024 There are no obvious v10 Xlaevis. L or S genes in the conserved synteny view cf ''Xtrop ccdc142''. However the uncharacterized model called LOC108700300 is a candidate for ''Xla.ccdc142.S'' gene" current
  • 09:5509:55, 8 October 2024 diff hist +814‎ N XB-FEAT-29077010 ‎ Created page with "=''camp''= This is the community wiki page for the ''Xenopus camp'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. = Summary from NCBI for human CAMP= This gene encodes a member of an antimicrobial peptide family, characterized by a highly conserved N-terminal signal peptide containing a cathelin domain and a structurally variable cationic antimicrobial peptide, which is produced by extra..." current
  • 09:5109:51, 8 October 2024 diff hist +892‎ N XB-FEAT-29077006 ‎ Created page with "= ''camk2n1''= This is the community wiki page for the ''Xenopus camk2n1'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =NCBI summary for human CAMK2N1 - calcium/calmodulin dependent protein kinase II inhibitor 1= Enables calcium-dependent protein kinase inhibitor activity and protein kinase binding activity. Involved in several processes, including negative regulation of ERK1 and ERK2..." current
  • 08:5008:50, 8 October 2024 diff hist +308‎ N XB-FEAT-29076994 ‎ Created page with "= ''pierce1'' = This is the community wiki page for the ''Xenopus pierce1'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =Nomenclature changes= 07OCT2024 ''Xenopus'' gene symbol changed from ''c8h9orf116'' to ''pierce1''" current
  • 08:0808:08, 8 October 2024 diff hist +302‎ N XB-FEAT-29076978 ‎ Created page with "=''hoatz'' = This is the community wiki page for the ''Xenopus hoatz'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =Nomenclature changes= 07OCT2024 ''Xenopus'' gene symbol changed from ''c7h11orf88'' to ''hoatz ''" current

7 October 2024

2 October 2024

  • 07:2007:20, 2 October 2024 diff hist +4‎ XB-FEAT-29076930 ‎ →‎Nomenclature changes current
  • 07:1507:15, 2 October 2024 diff hist +761‎ N XB-FEAT-29076930 ‎ Created page with "= ‘’ pierce2’’ = This is the community wiki page for the ''Xenopus pierce2'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =Nomenclature changes= 02OCT2024 ''Xenopus'' gene symbol changed from ''c3h15orf65'' to ''pierce2'' ''Xenopus'' gene name changed from '' chromosome 3 C15orf65 homolog'' to ''piercer of microtubule wall 2'' annotation notes= 02OCT2024 Note that the orth..."
  • 07:1107:11, 2 October 2024 diff hist +74‎ XB-FEAT-29076926 ‎ →‎annotation notes current
  • 07:0907:09, 2 October 2024 diff hist +783‎ N XB-FEAT-29076926 ‎ Created page with "= ''c3h12orf75''= This is the community wiki page for the ''Xenopus c3h12orf75'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =Nomenclature changes= 01OCT2024 Xenopu gene name changed from ''overexpressed in colon carcinoma 1 protein'' to c''3h12orf75 ,chromosome 3 C12orf75 homolog'' Why? For some unknown reason, HGNC reverted the Human name to a ORF! =annotation notes= 01OCT202..."
  • 06:5406:54, 2 October 2024 diff hist +542‎ N XB-FEAT-29076922 ‎ Created page with "=''c2h3orf85''= This is the community wiki page for the X''enopus c2h3orf85'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 01OCT2024 Note that the orthologs assertions for this gene are from NCBI, which are based on sequence similarity and local synteny across vertebrate taxa. Synteny is not always conserved, so the flanking genes may not correspond when comparing gen..." current
  • 06:3606:36, 2 October 2024 diff hist +18‎ XB-FEAT-29076918 ‎ →‎c2h1orf232 current
  • 06:3506:35, 2 October 2024 diff hist +365‎ N XB-FEAT-29076918 ‎ Created page with "= c2h1orf232= This is the community wiki page for the Xenopus genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 01OCT2024 Note that the orthologs assertions for this gene are from NCBI, which are based on sequence similarity and local syteny across vertebrate taxa."
  • 06:1906:19, 2 October 2024 diff hist +18‎ XB-FEAT-29076914 ‎ →‎annotation notes current
  • 06:1806:18, 2 October 2024 diff hist −9‎ XB-FEAT-29076914 ‎ →‎‘’liat1’’
  • 06:1806:18, 2 October 2024 diff hist +705‎ N XB-FEAT-29076914 ‎ Created page with "= ‘’liat1’’ = This is the community wiki page for the ''Xenopus liat1'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =Nomenclature changes= 01OCT2024 ''Xenopus'' gene symbol changed from c2h17orf97 to ''liat1'' ''Xenopus'' gene name changed from ''C17orf97 homolog'' to ''ligand of ATE1'' =annotation notes= 01OCT2024 Note that the orthologs assertions for this gene are fr..."
  • 06:0806:08, 2 October 2024 diff hist +306‎ XB-FEAT-29076910 ‎ →‎annotation notes current
  • 06:0506:05, 2 October 2024 diff hist +30‎ XB-FEAT-29076910 ‎ →‎c2h17orf50
  • 05:5705:57, 2 October 2024 diff hist +209‎ N XB-FEAT-29076910 ‎ Created page with "= ''c2h17orf50''= This is the community wiki page for the ''Xenopus c2h17orf50'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase."
  • 05:5205:52, 2 October 2024 diff hist +783‎ N XB-FEAT-29076905 ‎ Created page with "= ''c10h20orf96''= This is the community wiki page for the ''Xenopus c9_10h20orf96'' and ''c10h20orf96'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 01OCT2024 (CJZ) Not that the nomenclature for ORF genes changed, and instead of being exactly the same as human, we now use 'c#' to indicated the chromosome in ''Xenopus'' that the ortholog resides, not the human chromoso..." current
  • 05:3205:32, 2 October 2024 diff hist +419‎ N XB-FEAT-29076897 ‎ Created page with "= ''btbd18''= This is the community wiki page for the ''Xenopus btbd18'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 01OCT2024 Added human mouse rat and chicken orthologs based on MCBI assertions, and supported by synteny. Note that there are no corresponding v10 gene models for ''btbd18' in ''X. laevis'' (CJZ)" current
  • 05:2205:22, 2 October 2024 diff hist −10‎ XB-FEAT-29076893 ‎ →‎‘’ankfn1’’ current
  • 05:2205:22, 2 October 2024 diff hist +349‎ N XB-FEAT-29076893 ‎ Created page with "= ‘’ankfn1’’ = This is the community wiki page for the Xenopus ‘’ ‘’ genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 01OCT2024 Orthologs added based on NCBI assertions and supported by synteny with ''Xenopus'' v10 genomes - CJZ"

1 October 2024

  • 11:5111:51, 1 October 2024 diff hist +529‎ N XB-FEAT-29076885 ‎ Created page with "= ''bbc3''= This is the community wiki page for the ''Xenopus bbc3'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 01OCT2024 I've put the human mouse and rat orthologs on the ''bbc3'' gene page based on NCBI assertions, although note that the synteny pattern is not conserved. Also, there '''does not''' appear to be ''bbc3.L/.S'' orthologs/v10 gene models in ''X. laevi..." current
  • 11:4211:42, 1 October 2024 diff hist +1,098‎ N XB-FEAT-29076881 ‎ Created page with "=''batf2''= This is the community wiki page for the ''Xenopus batf2'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 01OCT2024 I have added the ''X. laevis.L'' model for LOC108713883 to this gene page as ''batf2.L'', as it is supported by synteny, and the model was poorly annotated. NCBI had it characterized as ''basic leucine zipper transcriptional factor ATF-like 3..."
  • 11:1511:15, 1 October 2024 diff hist +939‎ N XB-FEAT-29076873 ‎ Created page with "= ''aunip''= This is the community wiki page for the ''Xenopus aunip'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =Summary for AUNIP - aurora kinase A and ninein interacting protein= Enables damaged DNA binding activity. Involved in double-strand break repair via homologous recombination; negative regulation of double-strand break repair via nonhomologous end joining; and spindle organi..." current
  • 10:4510:45, 1 October 2024 diff hist +300‎ N XB-FEAT-29076869 ‎ Created page with "= ''spmip1''= This is the community wiki page for the ''Xenopus spmip1'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =Nomenclature changes= 01OCT2024 Xenopus gene symbol changed from ''atp6v1fnb'' to ''spmip1''" current
  • 10:4110:41, 1 October 2024 diff hist +69‎ XB-FEAT-29076865 ‎ →‎atp5f1e current
  • 10:3110:31, 1 October 2024 diff hist −20‎ XB-FEAT-29076865 ‎ →‎‘’atp5f1e’’
  • 10:3110:31, 1 October 2024 diff hist +2‎ XB-FEAT-29076865 ‎ →‎‘’atp5f1e’’
  • 10:3110:31, 1 October 2024 diff hist +1,233‎ N XB-FEAT-29076865 ‎ Created page with "= ‘’atp5f1e’’ = This is the community wiki page for the Xenopus ‘’atp5f1e‘’ genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =summary from NCBI for Human '''ATP5F1E ATP synthase F1 subunit epsilon''' = This gene encodes a subunit of mitochondrial ATP synthase. Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the i..."
  • 10:2610:26, 1 October 2024 diff hist +636‎ N XB-FEAT-29076861 ‎ Created page with "=''arid3c''= This is the community wiki page for the Xenopus ‘’ arid3c‘’ genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =NCBI summary for ARID3C - AT-rich interaction domain 3C= This gene is a member of the ARID (AT-rich interaction domain) family of proteins. The ARID domain is a helix-turn-helix motif-based DNA-binding domain. ARID family members have roles in embryonic patterni..." current
  • 10:1110:11, 1 October 2024 diff hist +784‎ N XB-FEAT-29076857 ‎ Created page with "=''apof''= This is the community wiki page for the ''Xenopus apof'' genes, please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =summary from NCBI for Mouse Apof= Acts upstream of or within cholesterol efflux; cholesterol metabolic process; and triglyceride metabolic process. Predicted to be located in extracellular region. Predicted to be part of high-density lipoprotein particle and low-density lipopr..." current
  • 10:0510:05, 1 October 2024 diff hist +99‎ XB-FEAT-29076853 ‎ →‎summary fro ANKFN1 from interPro current
  • 10:0010:00, 1 October 2024 diff hist +714‎ N XB-FEAT-29076853 ‎ Created page with "=''ankfn1''= This is the community wiki page for the gene ''ankfn1'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase =summary fro ANKFN1 from interPro= Ankyrin repeat and fibronectin type-III domain-containing protein 1 (ANKFN1) contains two ANK repeats and a fibronectin type-III domain and may play a role in neuronal function [1]. Homologues are known from metazoa. Reference 1.Nmf9 Encodes a Highl..."
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