XB-FEAT-29229405

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Revision as of 19:35, 17 April 2026 by Xenbase (talk | contribs) (Created page with "= ''gsg1l''= THis is teh Xenbase wiki page for the ''Xenopus gsg1l'' genes. Feel free to record here any information relevant to these genes that is not recprded elsewhere on Xenbase. =nomenclature updates and synteny= 17APR2026 These are the true ''gsg1l'' ortholog, resideing on a Xtr.chr9 and Xla.9L locus corresponding to GeneID: 100485075 based on conserved synteny and BLASTp. The X.laevis gsg1l homeolog is thus GeneID:108701879 on chr 9_10L . I couldn't find an...")
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gsg1l

THis is teh Xenbase wiki page for the Xenopus gsg1l genes. Feel free to record here any information relevant to these genes that is not recprded elsewhere on Xenbase.

nomenclature updates and synteny

17APR2026

These are the true gsg1l ortholog, resideing on a Xtr.chr9 and Xla.9L locus corresponding to GeneID: 100485075 based on conserved synteny and BLASTp. The X.laevis gsg1l homeolog is thus GeneID:108701879 on chr 9_10L .

I couldn't find an X.laevis gsg1l homeolog on chr 9_10S.

X.tropicalis and other amphibians share synteny with basal gnathostomes though in human and other amniotes the gene block as been split into two.


Xtr, amphibians:

ENPP7-L> EEF2KMT> ALG1< GSG1L> KATNIP< GTF3C1> SNRNP25<

skate, callorhinchus

ENPP7-L> EEF2KMT> ALG1< C16orf89> TTC30< GSG1L> KATNIP>

teleosts EEF2KMT> ALG1< C16orf89> TTC30< GSG1L> FBXL16> SEPT-L<

Hs ENPP7p> EEF2KMT> ALG1< C16orf89> NAGPA> SEC14L5< PPL> Hs NPIPB6> SBK1< XPO6> GSG1L> KATNIP< GTF3C1> IL21R<

reptiles

ENPP7-L> EEF2KMT> ALG1< C16orf89> NAGPA> SEC14L5< PPL> IL20RB> GSG1L> KATNIP< GTF3C1> SNRNP25<


The GSG1L orthologs are human GeneID: 146395 and zebrafish GeneID: 664746.

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