XB-FEAT-5732027

ctu2

This is the community wiki page for the gene ctu2 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase

nomenclature changes

04/22/ 2016

Human name has changed for Entrez Gene: 348180. From cytosolic thiouridylase subunit 2 homolog (S. pombe) to cytosolic thiouridylase subunit 2

annotation notes

20SEPT2023

there does not appear to be a ctu2.S gene model in the v10 X. laevis genome annotation.

LOC108714968 is not the ctu2.S despite being in the 'correct' syntenic position- being flanked by rnf166.S and piezo1.S .

The refseq protein accessions are very different.

Xla.ctu2.L >lcl|Query_10001 NP_001034829.1 cytoplasmic tRNA 2-thiolation protein 2 [Xenopus tropicalis] MCEEEEVYCPELQDTTQGKSLGKTCMKCKESSAVLLIRAGDAFCKSCFKEYFVHKFRATLGKNRVIYPGEKVLLAFSGGPSSSAMVQQVQEGMSRDAPKKLRFVPGILFIDEGTTCGMSHEERQQNMSEVQNVLQQTGFPFYIVSLEQVFSLPGSILQRGVPEQRANYKQEVDRFMVQQQAQGETGCSDILENLAKLGVNVSESSRESDKMFQSTCRHPPDTHTQKLIQLFASAKTLTAKHQLLHTLRSHLILHIARTCGYSKVMSGESCTRLSVSLLSNISLGRGAFLPLDTGFCDSRYGDVDIIRPMREYSLKEIAFYNRLFHVSSVFIPALNTKVLENSSIQQLSEVFINRLQADFPSTVSTVYRTSEKLNVSKIDANQGTCAKERCLLCLSPLDTQVGEASAFHATQISHYISQKILMKFNDPANSSGKSCCQEGKCCKGPGYGDFCQPRALQAPSFVDMLCYGCRLTVKDLQSLDALPQYVLHEAEHRSRRIEMRKEIEEFLLDKDEENLH

LOC108714968

>lcl|Query_10002 XP_041417076.1 cyclin-O protein B [Xenopus laevis] METFIKKRKRLAIPESQEGSHYDCRCYKITKYESNRQGTCSSAVVLDPWSTFGNLMPDTLQNFMDYGETCYMFNKSLEEDFAPNNFLGKHSDIDETSWREVITTMIAAHRAFRLDFETLCLAVNYLERFLACTPLKAASLKVIGATCLYLACKVMEKSLPKIDMFLLLFCEDGFTAPLMYYLEKLVLRRLCFRLRAPTIEYFLEHFSLRRVSYKECPAAKINRAANAFTAARGIAALSMTRYGFHSYPPSLLAQCCLRVADQILQYDTWNRAHPRDCSGPLWRECMGKITHLVSSNKILLCKFMPGVFPETFPDLVSPPTKSGSKANI

[CJZ]