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4 April 2024
- 11:5211:52, 4 April 2024 diff hist +5 XB-FEAT-481134 →nomenclature changes current
- 11:5111:51, 4 April 2024 diff hist +47 XB-FEAT-481134 →nomenclature changes
- 11:4811:48, 4 April 2024 diff hist +311 XB-FEAT-481134 →nomenclature changes
- 11:4511:45, 4 April 2024 diff hist +1 XB-FEAT-481134 →hes5.1
- 09:2709:27, 4 April 2024 diff hist +4 XB-FEAT-6538722 →protein sequences current
- 09:2509:25, 4 April 2024 diff hist +406 XB-FEAT-6538722 →annotation notes
- 09:2109:21, 4 April 2024 diff hist −98 XB-FEAT-6538722 →protein seqeunces
- 09:2009:20, 4 April 2024 diff hist −17 XB-FEAT-6538722 →annotation notes
- 09:0309:03, 4 April 2024 diff hist −118 XB-FEAT-6538722 →Interpro domains
- 09:0209:02, 4 April 2024 diff hist 0 N File:Nightingale.snapshot.png No edit summary current
- 09:0109:01, 4 April 2024 diff hist +425 XB-FEAT-6538722 →protein sequnces
- 08:5108:51, 4 April 2024 diff hist +292 XB-FEAT-6538722 →annotation notes
- 08:4908:49, 4 April 2024 diff hist +150 XB-FEAT-6538722 →annotation notes
- 08:4708:47, 4 April 2024 diff hist +239 XB-FEAT-6538722 →esr-5
1 April 2024
- 12:4612:46, 1 April 2024 diff hist +4 XB-FEAT-5824117 →tff3.8 current
- 12:4612:46, 1 April 2024 diff hist +3,852 XB-FEAT-5824117 →summary from NCBI
- 12:4512:45, 1 April 2024 diff hist −1 XB-FEAT-6462248 →summary for TFF family from NCBI current
- 12:4512:45, 1 April 2024 diff hist +4,585 N XB-FEAT-22164459 Created page with "=''tff3.6''= This is the Xenbase wiki page for ''tff3.6'' genes- feel free to record here any information that is not captured elsewhere on Xenbase. = summary for TFF family from NCBI= Members of the trefoil family are characterized by having at least one copy of the trefoil motif, a 40-amino acid domain that contains three conserved disulfides. In mammals they are stable secretory proteins expressed in gastrointestinal mucosa. Their functions are not well defined, but..." current
- 12:4512:45, 1 April 2024 diff hist +4,267 XB-FEAT-22164454 →genome annotation notes current
- 12:4412:44, 1 April 2024 diff hist +4,437 XB-FEAT-22164449 →tff3.4 current
- 12:4412:44, 1 April 2024 diff hist −1 XB-FEAT-6462248 →synteny
- 12:4412:44, 1 April 2024 diff hist −2 XB-FEAT-6462248 →orthology and gene annotation notes
- 12:4212:42, 1 April 2024 diff hist +148 N XB-FEAT-22164449 Created page with "=''tff3.4''= This is the Xenbase wiki page for ''tff3.4'' genes- feel free to record here any information that is not captured elsewhere on Xenbase."
- 12:4012:40, 1 April 2024 diff hist 0 XB-FEAT-22164444 No edit summary current
- 12:3912:39, 1 April 2024 diff hist +4,594 N XB-FEAT-22164444 Created page with "=''tff3.4''= This is the Xenbase wiki page for ''tff3.4'' genes- feel free to record here any information that is not captured elsewhere on Xenbase. = summary for TFF family from NCBI= Members of the trefoil family are characterized by having at least one copy of the trefoil motif, a 40-amino acid domain that contains three conserved disulfides. In mammals they are stable secretory proteins expressed in gastrointestinal mucosa. Their functions are not well defined, bu..."
- 12:3912:39, 1 April 2024 diff hist +4,583 XB-FEAT-18006555 →tff3.2 current
- 12:3812:38, 1 April 2024 diff hist +4,413 XB-FEAT-5897916 →tff1 current
- 12:3612:36, 1 April 2024 diff hist +4,590 N XB-FEAT-6462248 Created page with "=''tff3.7''= This is the Xenbase wiki page for ''tff3.7'' genes- feel free to record here any information that is not captured elsewhere on Xenbase. = summary for TFF family from NCBI= Members of the trefoil family are characterized by having at least one copy of the trefoil motif, a 40-amino acid domain that contains three conserved disulfides. In mammals they are stable secretory proteins expressed in gastrointestinal mucosa. Their functions are not well defined, bu..."
- 12:0012:00, 1 April 2024 diff hist +4 XB-FEAT-5761596 →sccpdh.2 current
- 11:1911:19, 1 April 2024 diff hist +12 N XB-FEAT-18006555 Created page with "=''tff3.2''="
28 March 2024
- 13:2013:20, 28 March 2024 diff hist +4 XB-FEAT-5824117 →tff2
- 13:2013:20, 28 March 2024 diff hist +586 XB-FEAT-5824117 →tff2
- 13:1413:14, 28 March 2024 diff hist −2 XB-FEAT-1018553 →gene annotation notes current
- 13:1213:12, 28 March 2024 diff hist −154 XB-FEAT-22041699 →gene annotation notes current Tags: Replaced Manual revert
- 13:1013:10, 28 March 2024 diff hist +154 XB-FEAT-22041699 →fim-a.1 Tag: Reverted
- 13:0713:07, 28 March 2024 diff hist +427 XB-FEAT-1018553 →fgfr1
- 12:4912:49, 28 March 2024 diff hist +2,610 XB-FEAT-29091430 →nomenclature changes current
- 12:4912:49, 28 March 2024 diff hist +2,906 XB-FEAT-22067945 →nomenclature changes current
- 12:4812:48, 28 March 2024 diff hist +2,610 XB-FEAT-6492177 →nomenclature changes current
- 12:4512:45, 28 March 2024 diff hist +23 XB-FEAT-29097506 →Nomenclature updates current
- 12:4412:44, 28 March 2024 diff hist +23 XB-FEAT-29097510 →Nomenclature updates current
- 12:4112:41, 28 March 2024 diff hist +3,422 N XB-FEAT-29097510 Created page with "=''pgla.4''= This is the Xenbase wiki page for ''Xenopus'' ''pgla.4'' genes. Please record here anything that is not captured elsewhere on Xenbase. =Nomenclature updates= 28MARCH2024 The ‘’Xenopus’’ ‘’pgla’’ genes on Chr6/6L/6S, a cluster of tadem uncharacterized proteins, were assessed by Xenbase curators. Based on synteny, protein alignment and phylogenetic analysis, the following provisional gene nomenclature was decided upon. Note that in the v10..."
- 12:4112:41, 28 March 2024 diff hist +3,422 N XB-FEAT-29097506 Created page with "=''pgla.5''= This is the Xenbase wiki page for ''Xenopus'' ''pgla.5'' genes. Please record here anything that is not captured elsewhere on Xenbase. =Nomenclature updates= 28MARCH2024 The ‘’Xenopus’’ ‘’pgla’’ genes on Chr6/6L/6S, a cluster of tadem uncharacterized proteins, were assessed by Xenbase curators. Based on synteny, protein alignment and phylogenetic analysis, the following provisional gene nomenclature was decided upon. Note that in the v10..."
- 08:4608:46, 28 March 2024 diff hist −13 XB-FEAT-29091430 →nomenclature changes
- 08:2708:27, 28 March 2024 diff hist +882 N XB-FEAT-29091430 Created page with "=''pgla.3''= This is the Xenbase wiki page for the ''Xenopus pgla.3'' genes. Feel free to record here any information about this genes that is not captured else where on Xenbase. =nomenclature changes= 28March2024 Following a quick assessment of the v10 NCBI annotation for X. laevis on chr6L, there appears to be a duplication of 3 ''pgla'' genes. Xla.chr6L: ulk4.L< trak1.L> '''LOC121394631.L(‘pgla-like’)< LOC780753.L(‘pgla.S’)< pgla.L<''' pgq.L< >levi.L..."
- 08:2408:24, 28 March 2024 diff hist +882 N XB-FEAT-6492177 Created page with "=''pgla''= This is the Xenbase wiki page for the ''Xenopus'' ''pgla'' genes. Feel free to record here any information about this genes that is not captured else where on Xenbase. =nomenclature changes= 28March2024 Following a quick assessment of the v10 NCBI annotation for X. laevis on chr6L, there appears to be a duplication of 3 ''pgla'' genes. Xla.chr6L: ulk4.L< trak1.L> '''LOC121394631.L(‘pgla-like’)< LOC780753.L(‘pgla.S’)< pgla.L<''' pgq.L< >levi.L..."
- 08:1308:13, 28 March 2024 diff hist +573 N XB-FEAT-22067945 Created page with "=''pgla.2''= This is the Xenbase wiki page for the Xenopus genes ''pgla.2''. Feel free to records here any information about these genes that is not captured elsewhere on Xenbase. =nomenclature changes= 28MARCH2024 In the v10 ''X.laevis'' NCBI annotation, this gene was incorrectly called ''pgla.S'', but it '''is placed on chromosome 6L'''. Synteny and the NCBI annotation name is as a prepro-PGLa, and as it falls adjacent to other prepro-PGLa genes, we have given it..."
- 07:1607:16, 28 March 2024 diff hist +250 XB-FEAT-967821 →gene annotation notes current
- 06:5006:50, 28 March 2024 diff hist +129 XB-FEAT-967821 →gene annotation notes
- 06:4406:44, 28 March 2024 diff hist +42 XB-FEAT-967821 →gene annotation notes
- 06:4106:41, 28 March 2024 diff hist +160 XB-FEAT-967821 →gene annotation notes
27 March 2024
- 13:2213:22, 27 March 2024 diff hist +29 XB-FEAT-967821 →gene annotation notes
- 13:1813:18, 27 March 2024 diff hist +89 XB-FEAT-967821 →gene annotation notes
- 13:1613:16, 27 March 2024 diff hist +1,016 XB-FEAT-967821 →aadacl4
- 12:5412:54, 27 March 2024 diff hist −3 XB-FEAT-949454 →synteny from different genome releases & annotation notes current
- 12:5312:53, 27 March 2024 diff hist +14 XB-FEAT-949454 →synteny from different genome releases & annotation notes
- 12:5312:53, 27 March 2024 diff hist +887 XB-FEAT-949454 →nomenclature changes
- 12:1412:14, 27 March 2024 diff hist +3 XB-FEAT-949454 →trat1
- 12:0812:08, 27 March 2024 diff hist −2 XB-FEAT-485843 →annotation in earlier genome assemblies and synteny for Xenopus hoxd11 genes current
- 12:0812:08, 27 March 2024 diff hist +1,690 XB-FEAT-485203 →hoxd10 current
- 12:0612:06, 27 March 2024 diff hist 0 XB-FEAT-485843 →synteny patterns/annoations
- 12:0312:03, 27 March 2024 diff hist +1,756 XB-FEAT-485843 →hoxd11
- 11:1611:16, 27 March 2024 diff hist +5 XB-FEAT-485203 →hoxd10
18 March 2024
- 10:4110:41, 18 March 2024 diff hist 0 XB-FEAT-1000743 →nomenclature changes current
- 10:3910:39, 18 March 2024 diff hist −115 XB-FEAT-5794174 →gene function current
- 10:3410:34, 18 March 2024 diff hist +479 XB-FEAT-1013156 →ccdc96 current
- 10:2910:29, 18 March 2024 diff hist +490 XB-FEAT-6258447 →ccdc153 current
- 10:2510:25, 18 March 2024 diff hist +201 XB-FEAT-6073409 →ube2ql1 current
- 10:2110:21, 18 March 2024 diff hist +206 XB-FEAT-5813559 →nomenclature changes current
- 10:1910:19, 18 March 2024 diff hist +4 XB-FEAT-1004740 →cnih current
- 10:1910:19, 18 March 2024 diff hist +171 XB-FEAT-1004740 →cnih
- 10:1810:18, 18 March 2024 diff hist +156 XB-FEAT-1002678 →dnase1l3 current
- 10:1410:14, 18 March 2024 diff hist +129 XB-FEAT-997015 →agmat current
- 10:0510:05, 18 March 2024 diff hist +331 XB-FEAT-993716 →cnih4 current
- 10:0310:03, 18 March 2024 diff hist +179 XB-FEAT-489935 →fnta current
- 09:5609:56, 18 March 2024 diff hist +345 XB-FEAT-494042 →fntb current
14 March 2024
- 10:4010:40, 14 March 2024 diff hist +488 XB-FEAT-5935727 →unnamed current
- 10:2910:29, 14 March 2024 diff hist +392 XB-FEAT-5870894 →loc432289 current
- 10:0010:00, 14 March 2024 diff hist +392 N XB-FEAT-29098766 Created page with "=''LOC116412415'' = This is the community wiki page for ''LOC116412415''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =annotation notes= 13MARCH2024 Xenbase curators updated the gene name for this protein, from uncharacterized to 'myb DNA binding protein 5', after searching for orthologs groups (OG) in DIOPTs EggNogg6.0 tool." current
- 08:1508:15, 14 March 2024 diff hist +853 XB-FEAT-6040024 →cyp2e1 current
- 07:5007:50, 14 March 2024 diff hist +529 XB-FEAT-5870707 →loc100495517 current
- 07:4707:47, 14 March 2024 diff hist +550 XB-FEAT-5848842 →loc619584 current
- 07:4307:43, 14 March 2024 diff hist +537 XB-FEAT-5834337 →unnamed current
- 07:3907:39, 14 March 2024 diff hist +534 XB-FEAT-5952314 →loc100036663 current
- 07:1907:19, 14 March 2024 diff hist +707 N XB-FEAT-29082598 Created page with "=''cyp2k1.2''= This is the community wiki page for ''cyp2k1.2''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomenclature changes= 12March2024 'Xenopus'' gene name changed from ''LOC100495200'' to ''cyp2k1.2'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes. ''Xenopus'' nomenclature rules were applied for duplicated genes, and new gene..." current
- 07:1607:16, 14 March 2024 diff hist +761 N XB-FEAT-29081046 Created page with "=''cyp2g1''= This is the community wiki page for ''cyp2g1''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomenclature changes= 12March2024 'Xenopus'' gene name changed from ''LOC100492165, putative inactive cytochrome P450 2G1'' to ''cyp2g1, cytochrome P450 2G1'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes. ''Xenopus'' nomenclature..." current
- 07:1107:11, 14 March 2024 diff hist −16 XB-FEAT-29082542 →nomenclature changes current
- 07:1007:10, 14 March 2024 diff hist +724 N XB-FEAT-29082542 Created page with "=''cyp2k1.3''= This is the community wiki page for ''cyp2k1.3''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomenclature changes= 12March2024 'Xenopus'' gene name changed from ''LOC100494424'' and ''XB5870673'' to ''cyp2k1.7'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes. ''Xenopus'' nomenclature rules were applied for duplicated ge..."
- 07:0307:03, 14 March 2024 diff hist +308 XB-FEAT-6032722 →cyp2j2 current
13 March 2024
- 13:2613:26, 13 March 2024 diff hist +727 N XB-FEAT-29080474 Created page with "=''cyp2k6.1''= This is the community wiki page for ''cyp2k6.1''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomenclature changes= 03.12.2024 'Xenopus'' gene name changed from ''LOC108716384'' and ''LOC100490986'' to ''cyp2k6.1'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes. ''Xenopus'' nomenclature rules were applied for duplicated..." current
- 13:1913:19, 13 March 2024 diff hist +710 N XB-FEAT-29080766 Created page with "=''cyp2k4.2''= This is the community wiki page for ''cyp2k4.2''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomenclature changes= 12March2024 'Xenopus'' gene name changed from LOC100491603(cyp2k4) to ''cyp2k4.2'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes. ''Xenopus'' nomenclature rules were applied for duplicated genes, and new g..." current
- 13:1213:12, 13 March 2024 diff hist +715 N XB-FEAT-29086002 Created page with "=''cyp2k1.4''= This is the community wiki page for ''cyp2k1.4''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomenclature changes= 12.03.2024 'Xenopus'' gene name changed from LOC101732279 (cyp2k1-like) to ''cyp2k1.4'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes. ''Xenopus'' nomenclature rules were applied for duplicated genes, and..." current
- 13:0913:09, 13 March 2024 diff hist +716 N XB-FEAT-29082450 Created page with "=''cyp2k1.5''= This is the community wiki page for ''cyp2k1.5''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomenclature changes= 12March2024 'Xenopus'' gene name changed from LOC100494900 (cyp2k1-like) to ''cyp2k1.5'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes. ''Xenopus'' nomenclature rules were applied for duplicated genes, and..." current
- 13:0513:05, 13 March 2024 diff hist +715 N XB-FEAT-29082322 Created page with "=''cyp2k1.6''= This is the community wiki page for ''cyp2k1.6''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomeclature changes= 12March2024 'Xenopus'' gene name changed from LOC100494741 (cyp2k1-like) to ''cyp2k1.6'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes. ''Xenopus'' nomenclature rules were applied for duplicated genes, and..." current
- 12:5612:56, 13 March 2024 diff hist −4 XB-FEAT-5870673 →loc100494424 current
- 12:5612:56, 13 March 2024 diff hist +552 XB-FEAT-5870673 →loc100494424
- 12:2812:28, 13 March 2024 diff hist +532 XB-FEAT-5952276 →loc100490476 current
- 11:5111:51, 13 March 2024 diff hist 0 XB-FEAT-29089578 →nomenlcature changes current
- 11:5111:51, 13 March 2024 diff hist −23 XB-FEAT-29089578 →nomenclature changes
- 11:5111:51, 13 March 2024 diff hist +753 N XB-FEAT-29089578 Created page with "=''cyp2k6.5''= =nomenclature changes= This is the community wiki page for ''cyp2k6.5''. Feel free to record here any information relevant to this gene that is not captured elsewhere on Xenbase. =nomenlcature changes= 12March2024 'Xenopus'' gene name changed from ''LOC105947503'' and ''LOC10871722'' to ''cyp2k6.5'' following a assessment of synteny for this region of chr5/5L/5S, which contains are cluster of 30 cytochrome p450 genes, where Xenopus nomenclature rules w..."