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28 March 2024
- 12:4412:44, 28 March 2024 diff hist +23 XB-FEAT-29097510 →Nomenclature updates current
- 12:4112:41, 28 March 2024 diff hist +3,422 N XB-FEAT-29097510 Created page with "=''pgla.4''= This is the Xenbase wiki page for ''Xenopus'' ''pgla.4'' genes. Please record here anything that is not captured elsewhere on Xenbase. =Nomenclature updates= 28MARCH2024 The ‘’Xenopus’’ ‘’pgla’’ genes on Chr6/6L/6S, a cluster of tadem uncharacterized proteins, were assessed by Xenbase curators. Based on synteny, protein alignment and phylogenetic analysis, the following provisional gene nomenclature was decided upon. Note that in the v10..."
- 12:4112:41, 28 March 2024 diff hist +3,422 N XB-FEAT-29097506 Created page with "=''pgla.5''= This is the Xenbase wiki page for ''Xenopus'' ''pgla.5'' genes. Please record here anything that is not captured elsewhere on Xenbase. =Nomenclature updates= 28MARCH2024 The ‘’Xenopus’’ ‘’pgla’’ genes on Chr6/6L/6S, a cluster of tadem uncharacterized proteins, were assessed by Xenbase curators. Based on synteny, protein alignment and phylogenetic analysis, the following provisional gene nomenclature was decided upon. Note that in the v10..."
- 08:4608:46, 28 March 2024 diff hist −13 XB-FEAT-29091430 →nomenclature changes
- 08:2708:27, 28 March 2024 diff hist +882 N XB-FEAT-29091430 Created page with "=''pgla.3''= This is the Xenbase wiki page for the ''Xenopus pgla.3'' genes. Feel free to record here any information about this genes that is not captured else where on Xenbase. =nomenclature changes= 28March2024 Following a quick assessment of the v10 NCBI annotation for X. laevis on chr6L, there appears to be a duplication of 3 ''pgla'' genes. Xla.chr6L: ulk4.L< trak1.L> '''LOC121394631.L(‘pgla-like’)< LOC780753.L(‘pgla.S’)< pgla.L<''' pgq.L< >levi.L..."
- 08:2408:24, 28 March 2024 diff hist +882 N XB-FEAT-6492177 Created page with "=''pgla''= This is the Xenbase wiki page for the ''Xenopus'' ''pgla'' genes. Feel free to record here any information about this genes that is not captured else where on Xenbase. =nomenclature changes= 28March2024 Following a quick assessment of the v10 NCBI annotation for X. laevis on chr6L, there appears to be a duplication of 3 ''pgla'' genes. Xla.chr6L: ulk4.L< trak1.L> '''LOC121394631.L(‘pgla-like’)< LOC780753.L(‘pgla.S’)< pgla.L<''' pgq.L< >levi.L..."
- 08:1308:13, 28 March 2024 diff hist +573 N XB-FEAT-22067945 Created page with "=''pgla.2''= This is the Xenbase wiki page for the Xenopus genes ''pgla.2''. Feel free to records here any information about these genes that is not captured elsewhere on Xenbase. =nomenclature changes= 28MARCH2024 In the v10 ''X.laevis'' NCBI annotation, this gene was incorrectly called ''pgla.S'', but it '''is placed on chromosome 6L'''. Synteny and the NCBI annotation name is as a prepro-PGLa, and as it falls adjacent to other prepro-PGLa genes, we have given it..."
- 07:1607:16, 28 March 2024 diff hist +250 XB-FEAT-967821 →gene annotation notes current
- 06:5006:50, 28 March 2024 diff hist +129 XB-FEAT-967821 →gene annotation notes
- 06:4406:44, 28 March 2024 diff hist +42 XB-FEAT-967821 →gene annotation notes
- 06:4106:41, 28 March 2024 diff hist +160 XB-FEAT-967821 →gene annotation notes
27 March 2024
- 13:2213:22, 27 March 2024 diff hist +29 XB-FEAT-967821 →gene annotation notes
- 13:1813:18, 27 March 2024 diff hist +89 XB-FEAT-967821 →gene annotation notes
- 13:1613:16, 27 March 2024 diff hist +1,016 XB-FEAT-967821 →aadacl4
- 12:5412:54, 27 March 2024 diff hist −3 XB-FEAT-949454 →synteny from different genome releases & annotation notes current
- 12:5312:53, 27 March 2024 diff hist +14 XB-FEAT-949454 →synteny from different genome releases & annotation notes
- 12:5312:53, 27 March 2024 diff hist +887 XB-FEAT-949454 →nomenclature changes
- 12:1412:14, 27 March 2024 diff hist +3 XB-FEAT-949454 →trat1
- 12:0812:08, 27 March 2024 diff hist −2 XB-FEAT-485843 →annotation in earlier genome assemblies and synteny for Xenopus hoxd11 genes current
- 12:0812:08, 27 March 2024 diff hist +1,690 XB-FEAT-485203 →hoxd10 current