XB-FEAT-22167183: Difference between revisions
imported>Xenbase (''ripk3l.1'') |
imported>Xenbase |
||
| Line 4: | Line 4: | ||
12.31.2019 | 12.31.2019 | ||
This gene was renamed after a review by David Webb from the NCBI and Xenbase curators. It was changed from ''ripk3 gene 1'' one to a ripk3-like gene 1 after a synteny analysis. | This gene was renamed after a review by David Webb from the NCBI and Xenbase curators. It was changed from ''ripk3 gene 1'' one to a ''ripk3-'''like''' gene 1'' after a synteny analysis. | ||
In ''Xenopus'', the true ''ripk3'' genes occur in a conserved order, in humans, frog, lizard and turtles, as ''nfatc4''> ''ripk3''> ''adcy4''>, and is on Chromosome 1. | In ''Xenopus'', the true ''ripk3'' genes occur in a conserved order, in humans, frog, lizard and turtles, as ''nfatc4''> ''ripk3''> ''adcy4''>, and is on Chromosome 1. | ||
Revision as of 11:49, 31 December 2019
This is the community wiki page for the gene ripk3l.1 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature updates
12.31.2019
This gene was renamed after a review by David Webb from the NCBI and Xenbase curators. It was changed from ripk3 gene 1 one to a ripk3-like gene 1 after a synteny analysis.
In Xenopus, the true ripk3 genes occur in a conserved order, in humans, frog, lizard and turtles, as nfatc4> ripk3> adcy4>, and is on Chromosome 1.
In X. tropicalis, this ripk3-like gene 1 is on currently placed on Chr2, and in X. Laevis, on Chromosome 8, although this needs more study to determine for sure. ( watch this space!)
It seems that the ripk3l.1 and ripk3l.2 genes do not occur in other vertebrates except the caecillian (Rhinatrema bivittatum), and may represent an amphibian-specific gene duplication event.