XB-FEAT-22065609: Difference between revisions
(Created page with "= ''sprtn2'' = This is the community wiki page for ''sprtn2'' - please feel free to add any information that is relevant to this gene that is not already captured elsewhere in...") |
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=nomenclature changes= | =nomenclature changes= | ||
05JAN2023 | 05JAN2023 | ||
gene name changed from ''provisional ortholog of SprT-like N-terminal domain'' to ''SprT-like N-terminal domain 2 (provisional)'' | gene name changed from ''provisional ortholog of SprT-like N-terminal domain'' to ''SprT-like N-terminal domain like gene 2 (provisional)'' | ||
gene symbol changed from ''XB22065609 [provisional:sprtn]'' to '' | gene symbol changed from ''XB22065609 [provisional:sprtn]'' to ''sprtnl2''. | ||
both gene name and symbol are (provisional) awaiting HGNC/NCBI Ref Seq approval. | both gene name and symbol are (provisional) awaiting HGNC/NCBI Ref Seq approval. | ||
Revision as of 17:33, 14 March 2023
sprtn2
This is the community wiki page for sprtn2 - please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
nomenclature changes
05JAN2023 gene name changed from provisional ortholog of SprT-like N-terminal domain to SprT-like N-terminal domain like gene 2 (provisional)
gene symbol changed from XB22065609 [provisional:sprtn] to sprtnl2.
both gene name and symbol are (provisional) awaiting HGNC/NCBI Ref Seq approval.
synteny
X. laevis sprtn.S on Chromosome 5.S seems to be the true orthology of human SPRTN, with both being flanked by eglin1 and exoc8.
Human chr 1: RNA5SP80< ... EXOC8< ... SPRTN> ...LOC107985360> ... EGLN1< ...LOC122152336>
X. laevis chr5.S: sf3b5.S< ... exoc8.S< ...tsnax.S< ... egln1.S< .. sprtn.S> ... acta1.S< ... LOC108717893< ...
the 2 other X. tropicalis genes have been given provisional names sprtn2[geneID: 105945677) and sprtn3 [geneID: 105948375]
X. trop chr1: jsprp1> ...amh< ...sf3a2< ... plekhj1> ... dot1l> ... 'sprtn2'> ... ap3d1> ... mob3a> ... mknk2> ... btbd2> ... csnk1g2< ...
X. trop chr9: gng13> ... chtf18< ... rpusd1> ... msin< ... 'sprtn3'< ... LOC#3326> ... LOC#3470 ...