XB-FEAT-6001422: Difference between revisions

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= notes on synteny=
= notes on synteny=
25April2023


synteny is conserved between Xenopus and human, although the human gene is non-functional pseudogene:
in the v10 genome annotations, synteny is conserved between ''Xenopus'' and human (GeneID:13909), although the human gene is a non-functional pseudogene:


Xtrop XChr: ''semp7... fam172b ... trmt10c... pcnp''
X.trop.Chr2: ''semp7... '''fam172b''' ...txnl4b ... trmt10c... pcnp''


human Chr3:  SEMP7... FAM172BP... TRMT10C.... PCNP
Xla.Chr2L:rv  ''semp7.L ... '''fam172b.L'''  ... trmt10c. L ...''
 
human.Chr3:  SEMP7... '''FAM172BP'''... TRMT10C.... PCNP

Latest revision as of 10:45, 25 April 2023

fam172b

This is the community wiki page for the gene fam172b please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.

nomenclature changes

25APRIL2023 Xenopus gene symbol changed from XB6001422 [provisional] to fam172b.

Xenopus gene name changed from putative protein FAM172B to family with sequence similarity 172 member B

notes on synteny

25April2023

in the v10 genome annotations, synteny is conserved between Xenopus and human (GeneID:13909), although the human gene is a non-functional pseudogene:

X.trop.Chr2: semp7... fam172b ...txnl4b ... trmt10c... pcnp

Xla.Chr2L:rv semp7.L ... fam172b.L ... trmt10c. L ...

human.Chr3: SEMP7... FAM172BP... TRMT10C.... PCNP