XB-FEAT-877260: Difference between revisions
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there are 3 'RERG' family genes in ''Xenopus tropicalis'': | there are 3 'RERG' family genes in ''Xenopus tropicalis'': | ||
rerg | rerg RAS like estrogen regulated growth inhibitor on chr3/3L. XB-GENEPAGE-489596 | ||
rergl on Chr3 | rergl RERG/RAS-like on Chr3/3L/3S XB-GENEPAGE-6037389 | ||
rergl.2 (GeneID:100145332) | rergl.2 on Chr4 (GeneID:100145332) | ||
Based on pattern of synteny, the rergl.2 X. tropicalis gene (GeneID:100145332) is ''''NOT'''' the true ortholog of human RERG nor RERGL. It seems to be a Xenopus and possible amphibian species gene very similar to RERGL, so is named provisionally here with the 'gene 2' suffix, assuming it is a duplication oft the rergl gene. | |||
Revision as of 12:17, 25 April 2023
rergl.2
This is the community wiki page for the gene rergl.2 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature changes
25APRIL2023 Xenopus gene name changed from rergl2 (provisional) to rergl.2 (provisional).
synteny and orthology
there are 3 'RERG' family genes in Xenopus tropicalis:
rerg RAS like estrogen regulated growth inhibitor on chr3/3L. XB-GENEPAGE-489596
rergl RERG/RAS-like on Chr3/3L/3S XB-GENEPAGE-6037389
rergl.2 on Chr4 (GeneID:100145332)
Based on pattern of synteny, the rergl.2 X. tropicalis gene (GeneID:100145332) is 'NOT' the true ortholog of human RERG nor RERGL. It seems to be a Xenopus and possible amphibian species gene very similar to RERGL, so is named provisionally here with the 'gene 2' suffix, assuming it is a duplication oft the rergl gene.