XB-FEAT-940177: Difference between revisions

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imported>Xenbase
(→‎fas: Updated nomenclature, replaced: unnamed → fas (2))
imported>Xenbase
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=fas=  
=fas=  
This is the community wiki page for the gene ''fas'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
This is the community wiki page for the gene ''fas'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
=nomenclature notes=
fas (Fas cell surface death receptor ) is also called  Fas (TNF receptor superfamily, member 6)
=protein alignment=
alignment of 2 proteins in NCBI  NP_001096199.1 ( Xtrop)  vs  XP_018080527.1  ( X. laevis ) show significant similarity, ( at 3-bit)
NP_001096199.1  1    MLLPWICLFIALAAERNSASAINNIGDTSPAYTGKPSAPLRRFFKRELKCEDGEYPGNQYCCKNCPAGTYVENDCQENHQ  80
XP_018080527.1  1    MLLPWICLFITLAVERNSASAIHNIEDSSNTFIAKPSLSLHKVFKRQSKCLDWQYPGNQFCCGKCPAGTRVENDCQKEHE  80
NP_001096199.1  81  KPNCQPCTDGKDYMDKPNGYHQCLLCKRCDPEQGEDVHSPCTVFRNTVCKCKVNFFCGTNSTQDPRSCDHCQPCTQCEKG  160
XP_018080527.1  81  NSTCIPCTEGKDYMDQLNGYNQCLRCKPCD--QEQEVDSPCTVFHDTVCKCKANYFCSSNTSQDPRICDHCLPCTQCGNG  158
NP_001096199.1  161  VAESCTETRDTVCNKGSRYRWGLLAALILVAVGAGLLCVRCRQKPRPIYQPPTLTPLVKPYPSHLEDIDLETPLQDLADI  240
XP_018080527.1  159  IAEKCTATKDTVC-KGSRSHWAALGALIPLVVCA-VVCVRCRQKTRIIVPPRA--PQAEPYPSYLKDIDLEPHLQDLAGK  234
NP_001096199.1  241  MLHDDVVKCVRRMGLSNPTIDDIKNTNGQGREGRYQLLRSWYVQYGQMGALRHLIKTLRDQGLNKPADDFIDILNRRVQP  320
XP_018080527.1  235  MLYEQMVQCVRKMDLTEPVIDDIKNSHGKGFEGKYQLLRSWYTYHGQTGAFQQLIETLQERGFNRPAQNIIDFLKSKVQP  314

Revision as of 12:18, 15 September 2021

fas

This is the community wiki page for the gene fas please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase

nomenclature notes

fas (Fas cell surface death receptor ) is also called Fas (TNF receptor superfamily, member 6)

protein alignment

alignment of 2 proteins in NCBI NP_001096199.1 ( Xtrop) vs XP_018080527.1 ( X. laevis ) show significant similarity, ( at 3-bit)

NP_001096199.1 1 MLLPWICLFIALAAERNSASAINNIGDTSPAYTGKPSAPLRRFFKRELKCEDGEYPGNQYCCKNCPAGTYVENDCQENHQ 80

XP_018080527.1 1 MLLPWICLFITLAVERNSASAIHNIEDSSNTFIAKPSLSLHKVFKRQSKCLDWQYPGNQFCCGKCPAGTRVENDCQKEHE 80

NP_001096199.1 81 KPNCQPCTDGKDYMDKPNGYHQCLLCKRCDPEQGEDVHSPCTVFRNTVCKCKVNFFCGTNSTQDPRSCDHCQPCTQCEKG 160

XP_018080527.1 81 NSTCIPCTEGKDYMDQLNGYNQCLRCKPCD--QEQEVDSPCTVFHDTVCKCKANYFCSSNTSQDPRICDHCLPCTQCGNG 158

NP_001096199.1 161 VAESCTETRDTVCNKGSRYRWGLLAALILVAVGAGLLCVRCRQKPRPIYQPPTLTPLVKPYPSHLEDIDLETPLQDLADI 240

XP_018080527.1 159 IAEKCTATKDTVC-KGSRSHWAALGALIPLVVCA-VVCVRCRQKTRIIVPPRA--PQAEPYPSYLKDIDLEPHLQDLAGK 234

NP_001096199.1 241 MLHDDVVKCVRRMGLSNPTIDDIKNTNGQGREGRYQLLRSWYVQYGQMGALRHLIKTLRDQGLNKPADDFIDILNRRVQP 320

XP_018080527.1 235 MLYEQMVQCVRKMDLTEPVIDDIKNSHGKGFEGKYQLLRSWYTYHGQTGAFQQLIETLQERGFNRPAQNIIDFLKSKVQP 314