XB-FEAT-940811

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synteny

18OCT23

Note that true orthologs of GPR4 are flanked by elm1/2 and opa3 , while these grp4-like genes are flanked by shkbp1 and sptbn4.


Human: chr19: VASP> OPA3< GPR4< EML2< EML2-AS1>

ZFISH: CHR15: nova2> polr1g< gpr4< eml2< gipr>

Xtrop.chr8: fbxo46< gipr< eml1> gpr4> opa3>

Xtrop v10.chr8: shkbp1< XB5959819> MGC69520> sptbn4<

Annotation notes: XB5959819 and MGC69520 may end u/require merging as they seem to be partial/fragmented sequence accessions of the same gene. In this case, I still think the merged model should be grp4-like based on EggNog 5.0 analysis which matches both to the GRP4 protein tree.