XB-FEAT-22064334: Difference between revisions
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=cnfn.4= | =''cnfn.4''= | ||
This is the community wiki page for the gene ''cnfn.4'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase | This is the community wiki page for the gene ''cnfn.4'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. | ||
= | =nomenlcature changes= | ||
05FEb2025 | |||
to conform with ''Xenopus'' naming guidelines for duplicated genes, GeneID: 108696708 is henceforth recognized as ''cnfn.3.L'', while GeneID:108696707 /LOC108696707, which did not have an official nomenclature/ has been assigned ''cnfn.4.L''. | |||
Note that the left-right order for numbering the ''cnfn'' genes was not strictly followed to mainatain stable identifiers for gene models from earlier genome annotations (i.e. cnfn.1 and cnfn.2) | Note that the left-right order for numbering the ''cnfn'' genes was not strictly followed to mainatain stable identifiers for gene models from earlier genome annotations (i.e. cnfn.1 and cnfn.2) | ||
= | =Synteny= | ||
' | '''human''' | ||
TMEM145> MEGF8> '''CNFN'''< LIPE< (NB: no duplicates) | |||
'' | '''Mouse''' | ||
Tmem145> Megf8> '''Cnfn'''< Lipe< Cxcl17< | |||
'''''X. laevis''''' tmem145.L> megf8.L> '''cnfn.4.L< cnfn.3.L<''' cnfn.L< cnfn.2.L< | |||
'''''X. tropicalis''''' tmem145> megf8> '''cnfn.4< cnfn.3<''' cnfn< cnfn.2< | |||
Note the orthology is a many:1 | Note the orthology is a many:1 relationship with ''Xenopus'':human | ||
Latest revision as of 13:39, 4 February 2025
cnfn.4
This is the community wiki page for the gene cnfn.4 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
nomenlcature changes
05FEb2025
to conform with Xenopus naming guidelines for duplicated genes, GeneID: 108696708 is henceforth recognized as cnfn.3.L, while GeneID:108696707 /LOC108696707, which did not have an official nomenclature/ has been assigned cnfn.4.L.
Note that the left-right order for numbering the cnfn genes was not strictly followed to mainatain stable identifiers for gene models from earlier genome annotations (i.e. cnfn.1 and cnfn.2)
Synteny
human TMEM145> MEGF8> CNFN< LIPE< (NB: no duplicates)
Mouse Tmem145> Megf8> Cnfn< Lipe< Cxcl17<
X. laevis tmem145.L> megf8.L> cnfn.4.L< cnfn.3.L< cnfn.L< cnfn.2.L<
X. tropicalis tmem145> megf8> cnfn.4< cnfn.3< cnfn< cnfn.2<
Note the orthology is a many:1 relationship with Xenopus:human