XB-FEAT-5795333: Difference between revisions
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Human name has changed for Entrez Gene: 8707 | Human name has changed for human B3GALT2 [Entrez Gene: 8707] From UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 to Beta-1,3-galactosyltransferase 2. | ||
Xenopus names changed following this change for the ''b3galt2'' and ''b3galt2-like'' genes. | |||
12/30/19 | 12/30/19 | ||
Based on a report by David Webb at NCBI, this gene has been renamed ''b3galt2-like'', as it is not the true orthologue of human B3GALT2. | Based on a report by David Webb at RefSeq Team/NCBI, this gene has been renamed ''b3galt2-like'', as it is not the true orthologue of human B3GALT2. | ||
''Xenopus tropicalis'' geneID:100489278 is 1 of 6 ''b3galt2l''like genes just downstream of the ''ilf3'' gene on chromosome 3. XB has creatde new gene pages for each of these genes, as indicated below. | |||
'''Xtrop.chr3: stacked synteny pattern''' [v10 LOC# and gene name (new gene symbol) new XB-genepage-ID#] | |||
ilf3> | |||
LOC100489278: b3galt1-like 1< XB-GENEPAGE-29072392 | |||
LOC101733959: b3galt2-like (b3galt2l.8)< XB-GENEPAGE-29072343 | |||
LOC101732799: b3galt2-like (b3galt2l.9)< XB-GENEPAGE-29072323 | |||
LOC108646249: b3galt2-like (b3galt2l.10)< XB-GENEPAGE-29072376 | |||
LOC116409818: b3galt2-like (b3galt2l.11)< XB-GENEPAGE-29072331 | |||
LOC100380178: b3galt2l (b3galt2l.12)< XB-GENEPAGE-29072327 | |||
LOC100485652: b3galt2-like (b3galt2l.13)< XB-GENEPAGE-29072384 | |||
kcnt2l< | |||
qtrt1< | |||
=annotation notes= | |||
*Most reptiles and amphibians and basal mammals also have ''b3galt2-like'' genes, but the genes seem to be frequently lost or unannotated. | |||
(note:David Webb gives example of Rhinatrema bivittatum (two-lined caecilian)). | |||
=orthology notes= | |||
19APRIL2023 | 19APRIL2023 | ||
removed the human ortholog link from this page as they are not accurate. | XB removed the human ortholog link from this page as they are not accurate. | ||
Latest revision as of 10:49, 26 September 2023
b3galt2l
This is the community wiki page for the gene b3galt2l please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase.
nomenclature changes
01/12/2016
Human name has changed for human B3GALT2 [Entrez Gene: 8707] From UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 to Beta-1,3-galactosyltransferase 2.
Xenopus names changed following this change for the b3galt2 and b3galt2-like genes.
12/30/19
Based on a report by David Webb at RefSeq Team/NCBI, this gene has been renamed b3galt2-like, as it is not the true orthologue of human B3GALT2.
Xenopus tropicalis geneID:100489278 is 1 of 6 b3galt2llike genes just downstream of the ilf3 gene on chromosome 3. XB has creatde new gene pages for each of these genes, as indicated below.
Xtrop.chr3: stacked synteny pattern [v10 LOC# and gene name (new gene symbol) new XB-genepage-ID#]
ilf3>
LOC100489278: b3galt1-like 1< XB-GENEPAGE-29072392
LOC101733959: b3galt2-like (b3galt2l.8)< XB-GENEPAGE-29072343
LOC101732799: b3galt2-like (b3galt2l.9)< XB-GENEPAGE-29072323
LOC108646249: b3galt2-like (b3galt2l.10)< XB-GENEPAGE-29072376
LOC116409818: b3galt2-like (b3galt2l.11)< XB-GENEPAGE-29072331
LOC100380178: b3galt2l (b3galt2l.12)< XB-GENEPAGE-29072327
LOC100485652: b3galt2-like (b3galt2l.13)< XB-GENEPAGE-29072384
kcnt2l<
qtrt1<
annotation notes
- Most reptiles and amphibians and basal mammals also have b3galt2-like genes, but the genes seem to be frequently lost or unannotated.
(note:David Webb gives example of Rhinatrema bivittatum (two-lined caecilian)).
orthology notes
19APRIL2023
XB removed the human ortholog link from this page as they are not accurate.