User contributions for Xenbase

8 June 2026

• 17:1817:18, 8 June 2026 diff hist +307 N XB-FEAT-29079270 Created page with "= ''dysf'' = This is the community wiki page for the gene ''dysf'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =nomenclature updates= 7JUN2026 ''Xenopus'' gene name changed from ''LOC100488564, dysferlin'' to ''dysf, dysferlin''" current
• 17:1017:10, 8 June 2026 diff hist +597 N XB-FEAT-29078470 Created page with "=''sycn''= This is the community wiki page for the gene ''sycn''. Please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 7JUN2026 The true ortholog for human SYCN are on Chr 8/8L/8S in ''Xenopus'', and are flanked by ''pak4'' and ''nccrp1''. Note that the gene model on X.laevis 8L is a biotype= pseudogene so has the symbol ''sycnp.L'' ''Xenopus'' also have 2 more ''syncollin'' genes -..." current
• 17:0917:09, 8 June 2026 diff hist +411 XB-FEAT-29090530 →sycn.3 current
• 17:0817:08, 8 June 2026 diff hist +415 XB-FEAT-5892880 →sycn current
• 17:0317:03, 8 June 2026 diff hist +5 XB-FEAT-5892880 →sycn
• 17:0317:03, 8 June 2026 diff hist +190 N XB-FEAT-29090530 Created page with "=''sycn.3''= This is the community wiki page for the gene ''sycn.3''. Please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase."
• 16:4216:42, 8 June 2026 diff hist +343 XB-FEAT-22168643 →nomenclature changes current
• 16:3116:31, 8 June 2026 diff hist −21 XB-FEAT-5944457 →slc6a1l family member current
• 16:3016:30, 8 June 2026 diff hist +270 XB-FEAT-5944457 →annotation notes
• 16:3016:30, 8 June 2026 diff hist −271 XB-FEAT-5944457 →X. tropicalis protein
• 16:3016:30, 8 June 2026 diff hist +1 XB-FEAT-5944457 →annotation notes
• 16:3016:30, 8 June 2026 diff hist +198 XB-FEAT-5944457 →annoatation notes
• 16:2916:29, 8 June 2026 diff hist −11 XB-FEAT-5944457 →slc6xx family member
• 16:2516:25, 8 June 2026 diff hist +5 XB-FEAT-5944457 →slc6 family member
• 16:2516:25, 8 June 2026 diff hist +1,030 XB-FEAT-5944457 →unnamed

4 June 2026

• 19:1619:16, 4 June 2026 diff hist +763 N XB-FEAT-29077742 Created page with "= LOC116406936= =annotation notes= NP_001352655.1 protein BLAST in NCBI identifies this protein as having homology to "spaca4". It is called "bouncer" in zebrafish. A zebrafish researcher identified it and asked the NXR to make a Xtrop mutant of it- NXR has called the mutant line ''spaca4''. Synteny identifies LOC116406936 as the likely ortholog of SPACA4, sperm acrosome membrane-associated protein 4, but the v9.1 model isn't represented in the v10 assembly. Also,..." current

28 May 2026

• 14:5814:58, 28 May 2026 diff hist +225 N XB-FEAT-29083410 Created page with "=''smc6.2''= =nomenlcature updates= 27MAY2026 ''Xenopus'' gene names were updated from ''LOC100496941, structural maintenance of chromosomes protein 6'' to ''smc6.2, structural maintenance of chromosomes protein 6 gene 2''." current

27 May 2026

• 18:2518:25, 27 May 2026 diff hist 0 XB-FEAT-984595 →nomenlcature updates current
• 18:2518:25, 27 May 2026 diff hist +208 XB-FEAT-6049690 →npbwr2 current
• 18:2418:24, 27 May 2026 diff hist +213 XB-FEAT-984595 →npbwr1
• 17:5917:59, 27 May 2026 diff hist +842 XB-FEAT-983412 →npy1r current
• 17:5217:52, 27 May 2026 diff hist 0 XB-FEAT-22068789 →annotation notes current
• 17:5017:50, 27 May 2026 diff hist +975 N XB-FEAT-22068789 Created page with "=''npy1r''= This is the community wiki page for the gene ''npy1r'' . Please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =annotation notes= 27MAY2026 The ''X. laevis'' ''npy1r'' genes (Entrez Gene: 108696448 and Entrez Gene: 378693) were mis-annotated in the v10 genome, being called ''npy2r.L'' and ''npy2r.S''. '''Synteny''' and sequence similarity support the change of name and migration for these..."
• 14:2614:26, 27 May 2026 diff hist +10 XB-FEAT-29077362 →nomenclature updates current
• 14:2514:25, 27 May 2026 diff hist +180 XB-FEAT-29077362 →plekhg4bl
• 14:2514:25, 27 May 2026 diff hist +854 N XB-FEAT-29077362 Created page with "= ''plekhg4bl''= =nomenclature updates= 27MAY2025 ''Xenopus'' gene name & symbol was changed from KIAA1755, KIAA1755 ortholog to ''plekhg4bl, pleckstrin homology and RhoGEF domain containing G4B like''. This is based on the ''X.alevis S'' protein which '''was''' characterized as a "pleckstrin homology and RhoGEF domain containing G4B like", and the gene symbol in human with the same root name. THis decision is supported by synteny, in that all 3 ''Xenopus'' models a..."

26 May 2026

• 15:0615:06, 26 May 2026 diff hist +142 XB-FEAT-29082798 →nomenclature updates current
• 15:0515:05, 26 May 2026 diff hist +1 XB-FEAT-29082798 →protein for Xtr.nat16.3
• 15:0415:04, 26 May 2026 diff hist +1 XB-FEAT-29082798 →nat16.3
• 14:0114:01, 26 May 2026 diff hist +2 XB-FEAT-29082798 →protein for Xtr.nat16.3
• 14:0114:01, 26 May 2026 diff hist +609 XB-FEAT-29082798 →nomenclature updates
• 14:0014:00, 26 May 2026 diff hist 0 XB-FEAT-29082798 →nomenclature updates
• 14:0014:00, 26 May 2026 diff hist +757 N XB-FEAT-29082798 Created page with "=''nat16.3''= =nomenclature updates= 25MAY2026 "'Xenopus'' gene symbol and name were updated, changing from ''LOC100495706, probable N-acetyltransferase 16'' to ''nat16.3, N-acetyltransferase 16 gene 3''. The protein for the tropicalis gene matches the NAT16 homology group in >70 species ( using EggNog5.0) with very high confidence, and the protein has already been characterised at a nat16 ortholog. There are several duplicates of ''nat16'' in ''Xenopus'', all on c..."

22 May 2026

• 20:1620:16, 22 May 2026 diff hist +10 XB-FEAT-970485 →nomenlcature updates current
• 20:1620:16, 22 May 2026 diff hist +296 XB-FEAT-970485 →bola2
• 20:0720:07, 22 May 2026 diff hist +5 XB-FEAT-970485 →bola2
• 20:0120:01, 22 May 2026 diff hist +51 XB-FEAT-29093674 →nomenclature changes current
• 19:5819:58, 22 May 2026 diff hist +526 N XB-FEAT-29093674 Created page with "=''kinx''= This is the community wiki page for the gene ''kinx'' please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase. =nomenclature changes= 21MAY2026 A new ''Xenopus'' gene symbol was assigned ''kinx'', changing from LOC116407995. The syntentic and equally characterised ''X.laevis S'' gene was also added to the gene page. The ''kinx'' symbol is shared by other taxa with genes/proteins similarly chara..."
• 19:4119:41, 22 May 2026 diff hist +72 XB-FEAT-947876 →nomenclature changes current
• 19:3719:37, 22 May 2026 diff hist −363 XB-FEAT-947876 →summary for human METTL2B from NCBI
• 19:3719:37, 22 May 2026 diff hist +59 XB-FEAT-947876 →nomenclature changes
• 19:3219:32, 22 May 2026 diff hist −240 XB-FEAT-947876 →nomenclature changes
• 19:2619:26, 22 May 2026 diff hist +5 XB-FEAT-947876 →mettl2b
• 19:2119:21, 22 May 2026 diff hist +301 XB-FEAT-947876 →nomenclature changes
• 19:1419:14, 22 May 2026 diff hist +12 XB-FEAT-492114 →orthology & synteny notes current
• 19:1419:14, 22 May 2026 diff hist +2 XB-FEAT-492114 →nomenclature updates
• 19:1019:10, 22 May 2026 diff hist +326 N XB-FEAT-29079690 Created page with "=''ano9''= This is the community wiki page for the gene ''ano9''. Please feel free to add here any relevant information about this gene that is not already captured elsewhere in Xenbase. =nomenclature changes= 21MAY2026 ''Xenopus'' gene was renamed ''ano9'', changing from LOC100489387 following orthology analysis by NCBI." current
• 15:2415:24, 22 May 2026 diff hist −1 XB-FEAT-5742370 →nomenclature changes current

21 May 2026

• 21:2821:28, 21 May 2026 diff hist +3 XB-FEAT-996397 →drc5 current
• 21:2821:28, 21 May 2026 diff hist +229 XB-FEAT-996397 →tcte1