XB-FEAT-22064334: Difference between revisions
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=nomenclature changes= | =nomenclature changes= | ||
9/14/2021 | 9/14/2021 | ||
Based on synteny analysis | Based on synteny analysis this gene has been named ''cnfn.4, cornifelin, gene 4''. | ||
It was previously annotated as "LOC100495837: cornifelin homolog" in ''X. tropicalis'', and "LOC108696707 cornifelin homolog A-like" in ''X. laevis''. | It was previously annotated as "LOC100495837: cornifelin homolog" in ''X. tropicalis'', and "LOC108696707 cornifelin homolog A-like" in ''X. laevis''. | ||
Note that the left-right order for numbering the ''cnfn'' genes was not strictly followed to mainatain stable identifiers for gene models from earlier geneome annotations (i.e. cnfn.1 and cnfn.2) | |||
=synteny notes= | =synteny notes= | ||
Revision as of 10:17, 6 September 2022
cnfn.4
This is the community wiki page for the gene cnfn.4 please feel free to add any information that is relevant to this gene that is not already captured elsewhere in Xenbase
nomenclature changes
9/14/2021 Based on synteny analysis this gene has been named cnfn.4, cornifelin, gene 4.
It was previously annotated as "LOC100495837: cornifelin homolog" in X. tropicalis, and "LOC108696707 cornifelin homolog A-like" in X. laevis.
Note that the left-right order for numbering the cnfn genes was not strictly followed to mainatain stable identifiers for gene models from earlier geneome annotations (i.e. cnfn.1 and cnfn.2)
synteny notes
X. tropicalis Chr7: tmem145> ... megf8> ... cnfn.4< ... cnfn.3< .. cnfn.1< ... cnfn2< ...
X. laevis Chr7.L: tmem145.L> ... megf8.L> ... cnfn.4.L < ... cnfn3.L< ... cnfn.1.L< ... cnfn.2.L< ...
X. laevis Chr7.S: tmem145.S> .... megf8.S> ... cnfn.1.S< ... < cnfn.2.S
Mouse Chr7: Tmem145> .... Megf8> ... Cnfn< ...Lipe< ... Cxcl17<
Human Chr19: TMEM145> .... MEGF8> ... CNFN< ...LIPE< ... CXCL17<
Note the orthology is a many:1 relationahips Xenopus:human